Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HOXC6P09630 ZFRP1-201ENST00000457579 2970 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC6P09630 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC6P09630 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC6P09630 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC6P09630 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HOXC6P09630 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC6P09630 AL357515.1-201ENST00000402967 542 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC6P09630 AC079809.1-201ENST00000415468 276 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC6P09630 VN1R37P-201ENST00000419096 748 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC6P09630 AL645608.4-201ENST00000423619 154 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 RPL12P34-201ENST00000424532 479 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 MTCYBP15-201ENST00000433123 1127 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 MTCYBP21-201ENST00000443300 1113 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 RPL7AP61-201ENST00000443410 636 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 MTND5P8-201ENST00000449817 1083 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC6P09630 AC090589.1-201ENST00000473109 362 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 NIP7P2-201ENST00000485801 544 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 AC025674.1-201ENST00000507074 324 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC6P09630 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.51□□□□□ -1.53
HOXC6P09630 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC6P09630 AC040958.1-201ENST00000561102 201 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.51□□□□□ -1.53
HOXC6P09630 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC6P09630 MIR4675-201ENST00000577898 77 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 PRPF19P1-201ENST00000584766 898 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.51□□□□□ -1.53
HOXC6P09630 AP000770.2-201ENST00000623694 100 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.51□□□□□ -1.53
HOXC6P09630 AC125257.1-201ENST00000560400 2930 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 MTCO1P15-201ENST00000529569 1526 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HOXC6P09630 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.51□□□□□ -1.53
HOXC6P09630 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC6P09630 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
HOXC6P09630 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC6P09630 OR56B2P-202ENST00000641377 2453 ntBASIC5.51□□□□□ -1.53
HOXC6P09630 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HOXC6P09630 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC6P09630 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC6P09630 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC6P09630 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC6P09630 AC083843.2-201ENST00000568248 6253 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC6P09630 SMG1P6-201ENST00000532337 2930 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 RNA5SP447-201ENST00000363749 119 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 AL035079.1-201ENST00000405210 287 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC6P09630 RNU4-25P-201ENST00000410569 230 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 ATG4AP1-201ENST00000416893 538 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 MRPS21P2-201ENST00000424704 264 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC6P09630 AC073143.1-201ENST00000436316 395 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC6P09630 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC6P09630 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC6P09630 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC6P09630 NUTF2P7-201ENST00000453086 375 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 PPIAP21-201ENST00000464473 501 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXC6P09630 AC013356.1-201ENST00000489027 564 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC6P09630 RNU6-760P-201ENST00000516078 97 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 RNU2-30P-201ENST00000516209 141 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC6P09630 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC6P09630 AL121594.4-201ENST00000556211 1196 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC6P09630 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXC6P09630 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC6P09630 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC6P09630 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXC6P09630 MLECP1-201ENST00000615893 709 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 AL121873.1-201ENST00000616013 524 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 AC091046.2-201ENST00000620775 665 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 AC010608.3-201ENST00000625048 527 ntBASIC5.5□□□□□ -1.53
HOXC6P09630 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXC6P09630 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
HOXC6P09630 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HOXC6P09630 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXC6P09630 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC6P09630 RBPJP2-201ENST00000618187 1444 ntBASIC5.49□□□□□ -1.53
HOXC6P09630 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC6P09630 AC008758.3-201ENST00000507003 1829 ntBASIC5.49□□□□□ -1.53
HOXC6P09630 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HOXC6P09630 RNU6-670P-201ENST00000364312 104 ntBASIC5.49□□□□□ -1.53
HOXC6P09630 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HOXC6P09630 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXC6P09630 AL353692.2-201ENST00000407054 335 ntBASIC5.49□□□□□ -1.53
HOXC6P09630 AL139039.2-201ENST00000407436 479 ntBASIC5.49□□□□□ -1.53
HOXC6P09630 U3.32-201ENST00000408116 212 ntBASIC5.49□□□□□ -1.53
HOXC6P09630 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXC6P09630 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXC6P09630 RPEP3-201ENST00000425462 676 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms