Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.57□□□□□ -1.36
HMGB1P09429 KRT19P6-201ENST00000510983 209 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 RNU6-513P-201ENST00000516104 104 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.57□□□□□ -1.36
HMGB1P09429 SOD1P3-201ENST00000518682 454 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 AC104115.2-201ENST00000523026 687 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 AC004217.3-201ENST00000551552 878 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 AC010735.1-201ENST00000567305 1026 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.57□□□□□ -1.36
HMGB1P09429 MTCO1P40-201ENST00000574371 625 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 AC010503.3-201ENST00000594355 540 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 AC009237.13-201ENST00000603193 276 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 LLPHP1-201ENST00000603571 367 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 OR6R2P-201ENST00000609216 300 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 RNA5SP439-201ENST00000617595 124 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 AP002371.2-201ENST00000624450 503 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.57□□□□□ -1.36
HMGB1P09429 AL121594.5-201ENST00000631724 573 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGB1P09429 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HMGB1P09429 ZNF33CP-201ENST00000432492 2030 ntBASIC6.57□□□□□ -1.36
HMGB1P09429 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.57□□□□□ -1.36
HMGB1P09429 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HMGB1P09429 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB1P09429 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HMGB1P09429 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.56□□□□□ -1.36
HMGB1P09429 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB1P09429 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB1P09429 RNU5B-1-201ENST00000363286 116 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 RN7SKP6-201ENST00000364795 319 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB1P09429 RNU6-1151P-201ENST00000384684 107 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 OR2AT2P-201ENST00000413438 905 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 BMS1P17-202ENST00000416720 316 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB1P09429 NDUFB4P8-201ENST00000435351 367 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB1P09429 AC044797.1-201ENST00000445744 679 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.56□□□□□ -1.36
HMGB1P09429 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 AL450023.1-201ENST00000450868 751 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 BX276092.4-201ENST00000452056 248 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB1P09429 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB1P09429 RN7SL727P-201ENST00000482164 296 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB1P09429 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB1P09429 AC112198.4-201ENST00000515450 351 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 RNU6-488P-201ENST00000515918 99 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 HIGD1AP6-201ENST00000521833 279 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 IGKV2-4-201ENST00000523070 340 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 TRIM51DP-201ENST00000529746 596 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB1P09429 AC090022.1-201ENST00000546569 311 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.56□□□□□ -1.36
HMGB1P09429 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB1P09429 MIR7853-201ENST00000584820 132 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 AC027243.2-201ENST00000602530 724 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.56□□□□□ -1.36
HMGB1P09429 AC133794.1-201ENST00000602731 914 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB1P09429 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 AC005840.5-201ENST00000619166 599 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 AC022079.2-201ENST00000619739 566 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.56□□□□□ -1.36
HMGB1P09429 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 AC114786.1-201ENST00000512892 1415 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HMGB1P09429 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 AC093591.2-201ENST00000565254 3843 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 AC087516.1-201ENST00000561236 2428 ntBASIC6.56□□□□□ -1.36
HMGB1P09429 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HMGB1P09429 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HMGB1P09429 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGB1P09429 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB1P09429 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB1P09429 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB1P09429 RN7SKP292-201ENST00000365522 317 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB1P09429 GTF3AP1-201ENST00000416942 1004 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 RPS3P2-201ENST00000421346 701 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGB1P09429 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB1P09429 PSMA2P3-201ENST00000429685 675 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB1P09429 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB1P09429 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB1P09429 AP000547.1-201ENST00000454360 617 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 RN7SL583P-201ENST00000475692 287 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB1P09429 AC091912.1-201ENST00000511351 248 ntBASIC6.55□□□□□ -1.36
HMGB1P09429 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGB1P09429 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.55□□□□□ -1.36
HMGB1P09429 AC100784.1-201ENST00000522790 310 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms