Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL1A1P02452 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL1A1P02452 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL1A1P02452 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.43□□□□□ -1.54
COL1A1P02452 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.43□□□□□ -1.54
COL1A1P02452 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL1A1P02452 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.43□□□□□ -1.54
COL1A1P02452 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL1A1P02452 AL050305.1-201ENST00000399993 1230 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 RNA5SP317-201ENST00000410176 116 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 RNA5SP311-201ENST00000411290 116 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 RPL23AP52-201ENST00000439311 478 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 AC044797.1-201ENST00000445744 679 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.43□□□□□ -1.54
COL1A1P02452 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COL1A1P02452 AC034236.1-201ENST00000469891 373 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 HMGB3P16-201ENST00000508037 287 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 RNA5SP315-201ENST00000516340 116 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 RNA5SP312-201ENST00000517068 116 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.43□□□□□ -1.54
COL1A1P02452 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.43□□□□□ -1.54
COL1A1P02452 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 AL355852.1-201ENST00000454081 1771 ntBASIC5.43□□□□□ -1.54
COL1A1P02452 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.43□□□□□ -1.54
COL1A1P02452 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.43□□□□□ -1.54
COL1A1P02452 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL1A1P02452 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.43□□□□□ -1.54
COL1A1P02452 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL1A1P02452 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL1A1P02452 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL1A1P02452 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL1A1P02452 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.42□□□□□ -1.54
COL1A1P02452 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.42□□□□□ -1.54
COL1A1P02452 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.42□□□□□ -1.54
COL1A1P02452 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
COL1A1P02452 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.42□□□□□ -1.54
COL1A1P02452 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.42□□□□□ -1.54
COL1A1P02452 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.42□□□□□ -1.54
COL1A1P02452 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL1A1P02452 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL1A1P02452 RNU1-83P-201ENST00000363426 164 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 AL592291.1-201ENST00000403830 352 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 PPIAP31-201ENST00000405422 495 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 CASKP1-201ENST00000412870 582 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 OR2AH1P-201ENST00000425717 928 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 NFYAP1-201ENST00000431953 972 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 RPL34P6-201ENST00000432390 345 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 OR4C10P-201ENST00000434991 931 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.42□□□□□ -1.54
COL1A1P02452 PHBP16-201ENST00000446318 950 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 AC022034.3-201ENST00000471393 478 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL1A1P02452 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.42□□□□□ -1.54
COL1A1P02452 AC025884.1-201ENST00000556034 378 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.42□□□□□ -1.54
COL1A1P02452 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.42□□□□□ -1.54
COL1A1P02452 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.42□□□□□ -1.54
COL1A1P02452 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
COL1A1P02452 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.42□□□□□ -1.54
COL1A1P02452 CASC19-255ENST00000641733 1385 ntBASIC5.42□□□□□ -1.54
COL1A1P02452 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL1A1P02452 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.42□□□□□ -1.54
COL1A1P02452 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL1A1P02452 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL1A1P02452 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
COL1A1P02452 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL1A1P02452 OR5P1P-201ENST00000299512 925 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 AL121657.1-201ENST00000327215 531 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 SNORA11F-201ENST00000408237 128 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 RN7SKP167-201ENST00000411047 285 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.41□□□□□ -1.54
COL1A1P02452 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.41□□□□□ -1.54
COL1A1P02452 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.41□□□□□ -1.54
COL1A1P02452 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL1A1P02452 AC069304.1-201ENST00000491593 704 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 RN7SL691P-201ENST00000494487 301 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.41□□□□□ -1.54
COL1A1P02452 MED28P5-201ENST00000528254 438 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.41□□□□□ -1.54
COL1A1P02452 IMMP1LP1-201ENST00000605170 488 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.41□□□□□ -1.54
COL1A1P02452 AC006065.6-201ENST00000625201 545 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 MIR3653-201ENST00000625572 110 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL1A1P02452 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
COL1A1P02452 AC139769.1-204ENST00000472297 1931 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL1A1P02452 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL1A1P02452 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
COL1A1P02452 AL359922.3-201ENST00000624779 1670 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL1A1P02452 EIF2AP4-201ENST00000424793 1781 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 AC004656.1-201ENST00000568479 4951 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.41□□□□□ -1.54
COL1A1P02452 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL1A1P02452 AC000374.1-201ENST00000434698 1745 ntBASIC5.41□□□□□ -1.54
COL1A1P02452 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.4□□□□□ -1.54
COL1A1P02452 MIR383-201ENST00000362257 73 ntBASIC5.4□□□□□ -1.54
COL1A1P02452 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.4□□□□□ -1.54
COL1A1P02452 RPS26P4-201ENST00000431743 355 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms