Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL589765.3-201ENST00000446084 462 ntBASIC5□□□□□ -1.61
PDGFBP01127 AC243772.1-201ENST00000451620 410 ntBASIC5□□□□□ -1.61
PDGFBP01127 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PDGFBP01127 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5□□□□□ -1.61
PDGFBP01127 HMGN1P9-201ENST00000515212 298 ntBASIC5□□□□□ -1.61
PDGFBP01127 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5□□□□□ -1.61
PDGFBP01127 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5□□□□□ -1.61
PDGFBP01127 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5□□□□□ -1.61
PDGFBP01127 AC019322.1-201ENST00000571869 389 ntBASIC5□□□□□ -1.61
PDGFBP01127 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5□□□□□ -1.61
PDGFBP01127 AC108738.1-201ENST00000603703 237 ntBASIC5□□□□□ -1.61
PDGFBP01127 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5□□□□□ -1.61
PDGFBP01127 AC096553.1-201ENST00000605169 829 ntBASIC5□□□□□ -1.61
PDGFBP01127 ARF4P1-201ENST00000605447 541 ntBASIC5□□□□□ -1.61
PDGFBP01127 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5□□□□□ -1.61
PDGFBP01127 FAM27B-201ENST00000610601 213 ntBASIC5□□□□□ -1.61
PDGFBP01127 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5□□□□□ -1.61
PDGFBP01127 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5□□□□□ -1.61
PDGFBP01127 AC145207.9-201ENST00000623802 325 ntBASIC5□□□□□ -1.61
PDGFBP01127 AC019080.5-201ENST00000624891 757 ntBASIC5□□□□□ -1.61
PDGFBP01127 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5□□□□□ -1.61
PDGFBP01127 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 AC006206.1-201ENST00000544842 3387 ntBASIC5□□□□□ -1.61
PDGFBP01127 AC079298.1-201ENST00000625026 1619 ntBASIC5□□□□□ -1.61
PDGFBP01127 MAPK10-338ENST00000641647 3362 ntBASIC5□□□□□ -1.61
PDGFBP01127 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5□□□□□ -1.61
PDGFBP01127 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFBP01127 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFBP01127 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PDGFBP01127 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFBP01127 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFBP01127 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PDGFBP01127 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFBP01127 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFBP01127 AL121657.1-201ENST00000327215 531 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 U3.10-201ENST00000364459 214 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.99□□□□□ -1.61
PDGFBP01127 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFBP01127 VDAC2P1-201ENST00000399358 958 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFBP01127 RAD23BP1-201ENST00000421404 1227 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 AC092651.1-201ENST00000426110 312 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFBP01127 CACYBPP1-201ENST00000438592 684 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 FHP1-201ENST00000442741 703 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.99□□□□□ -1.61
PDGFBP01127 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
PDGFBP01127 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFBP01127 IGBP1P4-201ENST00000503202 879 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFBP01127 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFBP01127 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDGFBP01127 AP001781.1-201ENST00000530977 207 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFBP01127 AC011477.5-201ENST00000586571 259 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFBP01127 AC073091.2-201ENST00000603205 907 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 AP004372.1-201ENST00000604842 844 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 AC007497.1-201ENST00000610421 561 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 RNA5SP439-201ENST00000617595 124 ntBASIC4.99□□□□□ -1.61
PDGFBP01127 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFBP01127 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDGFBP01127 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFBP01127 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFBP01127 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFBP01127 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFBP01127 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFBP01127 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFBP01127 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PDGFBP01127 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC092451.3-201ENST00000625067 1343 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFBP01127 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFBP01127 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFBP01127 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PDGFBP01127 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFBP01127 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC017079.1-201ENST00000333650 415 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 SNORA70.4-201ENST00000365509 134 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFBP01127 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 RNU6-225P-201ENST00000384613 103 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 MIR670-201ENST00000390142 98 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 AL358176.3-201ENST00000420757 454 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFBP01127 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFBP01127 AC099063.2-201ENST00000446360 662 ntBASIC4.98□□□□□ -1.61
PDGFBP01127 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFBP01127 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms