Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AP001521.2-201ENST00000608772 546 ntBASIC4.56□□□□□ -1.68
HCN1O60741 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.56□□□□□ -1.68
HCN1O60741 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HCN1O60741 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HCN1O60741 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.56□□□□□ -1.68
HCN1O60741 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
HCN1O60741 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HCN1O60741 AC120338.1-201ENST00000625074 1541 ntBASIC4.56□□□□□ -1.68
HCN1O60741 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HCN1O60741 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HCN1O60741 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HCN1O60741 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HCN1O60741 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HCN1O60741 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HCN1O60741 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.55□□□□□ -1.68
HCN1O60741 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HCN1O60741 RNA5SP87-201ENST00000384155 118 ntBASIC4.55□□□□□ -1.68
HCN1O60741 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HCN1O60741 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HCN1O60741 LRRC37BP1-201ENST00000398851 714 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AP000580.1-201ENST00000404439 358 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.55□□□□□ -1.68
HCN1O60741 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.55□□□□□ -1.68
HCN1O60741 AC022022.1-201ENST00000430304 178 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AL049745.1-201ENST00000433953 286 ntBASIC4.55□□□□□ -1.68
HCN1O60741 RHOT1P3-201ENST00000436571 331 ntBASIC4.55□□□□□ -1.68
HCN1O60741 RPS29P9-201ENST00000440360 171 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.55□□□□□ -1.68
HCN1O60741 IGHV5-78-201ENST00000450948 295 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AL691482.1-201ENST00000453255 87 ntBASIC4.55□□□□□ -1.68
HCN1O60741 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.55□□□□□ -1.68
HCN1O60741 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.55□□□□□ -1.68
HCN1O60741 HMGN1P8-201ENST00000463578 288 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AC108751.2-201ENST00000469993 231 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AC105918.1-201ENST00000474399 838 ntBASIC4.55□□□□□ -1.68
HCN1O60741 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.55□□□□□ -1.68
HCN1O60741 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.55□□□□□ -1.68
HCN1O60741 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.55□□□□□ -1.68
HCN1O60741 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.55□□□□□ -1.68
HCN1O60741 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.55□□□□□ -1.68
HCN1O60741 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.55□□□□□ -1.68
HCN1O60741 AC022784.5-201ENST00000522241 437 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AC021006.3-201ENST00000530771 192 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.55□□□□□ -1.68
HCN1O60741 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.55□□□□□ -1.68
HCN1O60741 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HCN1O60741 AL049874.4-201ENST00000557593 255 ntBASIC4.55□□□□□ -1.68
HCN1O60741 FAM106CP-201ENST00000582212 507 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.55□□□□□ -1.68
HCN1O60741 MIR6798-201ENST00000612887 67 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AC087385.3-201ENST00000620477 187 ntBASIC4.55□□□□□ -1.68
HCN1O60741 AC091953.3-201ENST00000623220 236 ntBASIC4.55□□□□□ -1.68
HCN1O60741 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HCN1O60741 SDAD1P1-202ENST00000524156 2051 ntBASIC4.55□□□□□ -1.68
HCN1O60741 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HCN1O60741 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
HCN1O60741 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.54□□□□□ -1.68
HCN1O60741 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.54□□□□□ -1.68
HCN1O60741 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HCN1O60741 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HCN1O60741 AL136116.2-201ENST00000404020 785 ntBASIC4.54□□□□□ -1.68
HCN1O60741 SNORA77-201ENST00000408716 125 ntBASIC4.54□□□□□ -1.68
HCN1O60741 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.54□□□□□ -1.68
HCN1O60741 RNU2-50P-201ENST00000410494 143 ntBASIC4.54□□□□□ -1.68
HCN1O60741 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 USP9YP9-201ENST00000429406 715 ntBASIC4.54□□□□□ -1.68
HCN1O60741 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.54□□□□□ -1.68
HCN1O60741 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 AL450023.3-201ENST00000440592 271 ntBASIC4.54□□□□□ -1.68
HCN1O60741 HMGB3P9-201ENST00000441799 583 ntBASIC4.54□□□□□ -1.68
HCN1O60741 FHP1-201ENST00000442741 703 ntBASIC4.54□□□□□ -1.68
HCN1O60741 AC112498.1-201ENST00000444401 332 ntBASIC4.54□□□□□ -1.68
HCN1O60741 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.54□□□□□ -1.68
HCN1O60741 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.54□□□□□ -1.68
HCN1O60741 HMGB1P4-201ENST00000455362 567 ntBASIC4.54□□□□□ -1.68
HCN1O60741 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.54□□□□□ -1.68
HCN1O60741 UBA52P3-201ENST00000491303 382 ntBASIC4.54□□□□□ -1.68
HCN1O60741 GAPDHP56-201ENST00000506031 988 ntBASIC4.54□□□□□ -1.68
HCN1O60741 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.54□□□□□ -1.68
HCN1O60741 AC109635.6-201ENST00000525487 1113 ntBASIC4.54□□□□□ -1.68
HCN1O60741 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 AC005868.1-201ENST00000536421 331 ntBASIC4.54□□□□□ -1.68
HCN1O60741 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.54□□□□□ -1.68
HCN1O60741 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.54□□□□□ -1.68
HCN1O60741 AC009117.1-201ENST00000563948 554 ntBASIC4.54□□□□□ -1.68
HCN1O60741 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.54□□□□□ -1.68
HCN1O60741 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HCN1O60741 TVP23CP2-201ENST00000571473 623 ntBASIC4.54□□□□□ -1.68
HCN1O60741 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms