Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.84□□□□□ -1.63
RIPK2O43353 RPL35AP24-201ENST00000413846 330 ntBASIC4.84□□□□□ -1.63
RIPK2O43353 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.84□□□□□ -1.63
RIPK2O43353 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK2O43353 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.84□□□□□ -1.63
RIPK2O43353 RN7SL244P-201ENST00000493405 297 ntBASIC4.84□□□□□ -1.63
RIPK2O43353 AC134698.5-201ENST00000519444 336 ntBASIC4.84□□□□□ -1.63
RIPK2O43353 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.84□□□□□ -1.63
RIPK2O43353 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.84□□□□□ -1.63
RIPK2O43353 MIR4716-201ENST00000579628 84 ntBASIC4.84□□□□□ -1.63
RIPK2O43353 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.84□□□□□ -1.63
RIPK2O43353 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.84□□□□□ -1.63
RIPK2O43353 AC009318.3-201ENST00000616916 503 ntBASIC4.84□□□□□ -1.63
RIPK2O43353 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.84□□□□□ -1.63
RIPK2O43353 AP003497.2-201ENST00000624220 967 ntBASIC4.84□□□□□ -1.63
RIPK2O43353 AC019080.5-201ENST00000624891 757 ntBASIC4.84□□□□□ -1.63
RIPK2O43353 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.84□□□□□ -1.63
RIPK2O43353 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.84□□□□□ -1.63
RIPK2O43353 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.84□□□□□ -1.63
RIPK2O43353 AC007382.1-201ENST00000624376 2618 ntBASIC4.84□□□□□ -1.63
RIPK2O43353 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RIPK2O43353 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.64
RIPK2O43353 AC074029.4-201ENST00000624796 1859 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 NEAT1-202ENST00000501122 22743 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.83□□□□□ -1.64
RIPK2O43353 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIPK2O43353 Z73965.1-201ENST00000623412 2297 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 IRF5P1-201ENST00000504852 2164 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 OR52B1P-201ENST00000316506 909 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RIPK2O43353 RNU1-94P-201ENST00000362627 173 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 MIR92A2-201ENST00000385299 75 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RIPK2O43353 AL139039.2-201ENST00000407436 479 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 CYCSP10-201ENST00000417973 294 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 AC073464.3-201ENST00000422564 712 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 SEC63P1-201ENST00000425785 1258 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 AC073069.1-201ENST00000428657 441 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 RHOT1P3-201ENST00000436571 331 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIPK2O43353 NDUFA5P8-201ENST00000449019 346 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 RN7SL41P-201ENST00000476144 297 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 ATG10-AS1-201ENST00000504846 648 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 SNORD116-26-201ENST00000516006 96 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.83□□□□□ -1.64
RIPK2O43353 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.83□□□□□ -1.64
RIPK2O43353 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIPK2O43353 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.83□□□□□ -1.64
RIPK2O43353 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.83□□□□□ -1.64
RIPK2O43353 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.83□□□□□ -1.64
RIPK2O43353 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIPK2O43353 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.83□□□□□ -1.64
RIPK2O43353 AC009303.3-201ENST00000591103 736 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.83□□□□□ -1.64
RIPK2O43353 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.83□□□□□ -1.64
RIPK2O43353 AC017076.1-201ENST00000607613 578 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 AC126175.1-201ENST00000617041 758 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 MIR6837-201ENST00000620884 64 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RIPK2O43353 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIPK2O43353 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIPK2O43353 HSPA8P18-201ENST00000439846 1928 ntBASIC4.83□□□□□ -1.64
RIPK2O43353 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.83□□□□□ -1.64
RIPK2O43353 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RIPK2O43353 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIPK2O43353 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RIPK2O43353 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RIPK2O43353 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RIPK2O43353 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
RIPK2O43353 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RIPK2O43353 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.82□□□□□ -1.64
RIPK2O43353 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.82□□□□□ -1.64
RIPK2O43353 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RIPK2O43353 SNURFL-201ENST00000309296 343 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 RNU6-618P-201ENST00000363518 112 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RIPK2O43353 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RIPK2O43353 RNU6-532P-201ENST00000384318 107 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.82□□□□□ -1.64
RIPK2O43353 LINC00993-201ENST00000420453 540 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 PDSS1P1-201ENST00000422953 1114 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 AL645608.4-201ENST00000423619 154 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.82□□□□□ -1.64
RIPK2O43353 AC093414.1-201ENST00000434712 514 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 OR52B5P-201ENST00000435337 951 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.82□□□□□ -1.64
RIPK2O43353 TXNP2-201ENST00000443918 295 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.82□□□□□ -1.64
RIPK2O43353 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.82□□□□□ -1.64
RIPK2O43353 RPL23AP65-201ENST00000475608 468 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 RPS4XP1-201ENST00000482189 787 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 RN7SL214P-201ENST00000487317 265 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 RNA5SP446-201ENST00000515955 82 ntBASIC4.82□□□□□ -1.64
RIPK2O43353 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.82□□□□□ -1.64
RIPK2O43353 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.82□□□□□ -1.64
RIPK2O43353 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms