Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRRTM2O43300 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.69□□□□□ -1.66
LRRTM2O43300 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.69□□□□□ -1.66
LRRTM2O43300 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRTM2O43300 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.69□□□□□ -1.66
LRRTM2O43300 RNU6-398P-201ENST00000384143 109 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 MT-TP-201ENST00000387461 68 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 RPS16P5-201ENST00000406501 404 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRTM2O43300 TRIM60P17-201ENST00000415181 719 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 CHEK2P3-201ENST00000416118 248 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 GLUD1P9-201ENST00000420997 1173 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRRTM2O43300 OR6K4P-201ENST00000423179 955 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRTM2O43300 RPL34P6-201ENST00000432390 345 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 AC093716.1-201ENST00000435923 377 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 RPL7AP61-201ENST00000443410 636 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.69□□□□□ -1.66
LRRTM2O43300 EIF4A1P11-201ENST00000451239 222 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 APOOP2-201ENST00000461561 539 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 UBA52P3-201ENST00000491303 382 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 AC012400.1-201ENST00000518452 381 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 AC021006.3-201ENST00000530771 192 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.69□□□□□ -1.66
LRRTM2O43300 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.69□□□□□ -1.66
LRRTM2O43300 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.69□□□□□ -1.66
LRRTM2O43300 AL008729.2-201ENST00000606393 473 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 AC104820.1-201ENST00000624183 307 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 ASNSP1-201ENST00000518311 1939 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.69□□□□□ -1.66
LRRTM2O43300 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.69□□□□□ -1.66
LRRTM2O43300 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.69□□□□□ -1.66
LRRTM2O43300 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRRTM2O43300 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LRRTM2O43300 AL672167.1-205ENST00000641112 3080 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 AC092747.4-201ENST00000620519 1861 ntBASIC4.69□□□□□ -1.66
LRRTM2O43300 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC083843.3-201ENST00000623679 2186 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LRRTM2O43300 RN7SKP95-201ENST00000362860 303 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LRRTM2O43300 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 MIR589-201ENST00000385238 99 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LRRTM2O43300 U3.32-201ENST00000408116 212 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC073136.2-201ENST00000417282 849 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 AC019050.1-201ENST00000418508 492 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC016712.1-201ENST00000431088 378 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 TRIM60P13-201ENST00000432350 1283 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 NDUFA5P1-201ENST00000433858 341 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.68□□□□□ -1.66
LRRTM2O43300 MTND3P4-201ENST00000453537 303 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRTM2O43300 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRTM2O43300 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRTM2O43300 OR52A4P-202ENST00000481634 799 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRTM2O43300 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.68□□□□□ -1.66
LRRTM2O43300 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC009117.1-201ENST00000563948 554 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 SS18L2P2-201ENST00000583960 235 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 FAM60CP-201ENST00000591086 664 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC131238.1-201ENST00000617135 328 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 AC011447.7-201ENST00000624228 1590 ntBASIC4.68□□□□□ -1.66
LRRTM2O43300 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LRRTM2O43300 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRRTM2O43300 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LRRTM2O43300 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
LRRTM2O43300 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LRRTM2O43300 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRRTM2O43300 AC011155.1-201ENST00000316512 456 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 AL359643.1-201ENST00000404109 423 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 AL034374.1-201ENST00000406329 351 ntBASIC4.67□□□□□ -1.66
LRRTM2O43300 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms