Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH17O14917 AL450023.1-201ENST00000450868 751 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 PTGES3P5-201ENST00000455109 434 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 RNU7-140P-201ENST00000459546 60 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 RN7SL515P-201ENST00000463999 297 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 RPL23AP12-201ENST00000467573 473 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH17O14917 RN7SL184P-201ENST00000488308 297 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH17O14917 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH17O14917 AC091860.1-201ENST00000505723 432 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH17O14917 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH17O14917 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH17O14917 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH17O14917 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH17O14917 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH17O14917 CCDC58P3-201ENST00000590792 430 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 AP001542.2-201ENST00000593141 364 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH17O14917 AC002487.1-201ENST00000604565 994 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 AC010975.3-201ENST00000618727 978 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH17O14917 MIR6730-201ENST00000622213 67 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 AC018445.2-201ENST00000622987 260 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH17O14917 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH17O14917 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDH17O14917 AC007938.2-201ENST00000604666 2634 ntBASIC5.29□□□□□ -1.56
PCDH17O14917 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDH17O14917 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH17O14917 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH17O14917 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH17O14917 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
PCDH17O14917 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH17O14917 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 SRRM1P3-201ENST00000426911 2678 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH17O14917 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PCDH17O14917 RNU1-146P-201ENST00000364015 165 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 RNU6-353P-201ENST00000364266 108 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 RNA5SP187-201ENST00000384400 119 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 SNORD116-12-201ENST00000384468 92 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 OR6E1P-201ENST00000414424 923 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 PCNPP4-201ENST00000414817 517 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 MTCO2P21-201ENST00000419780 677 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC009263.1-201ENST00000441193 1239 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 CR769776.1-201ENST00000441254 787 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH17O14917 CASP3P1-201ENST00000446037 609 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH17O14917 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDH17O14917 DUTP1-201ENST00000493631 470 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 RPSAP51-201ENST00000497462 645 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDH17O14917 PMS2P3-207ENST00000529061 717 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH17O14917 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDH17O14917 LRRC34P1-201ENST00000542742 915 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH17O14917 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.28□□□□□ -1.56
PCDH17O14917 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.28□□□□□ -1.56
PCDH17O14917 AC113368.1-201ENST00000603736 382 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 AC055764.2-201ENST00000610089 670 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 AC009159.2-201ENST00000617603 606 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 MIR6837-201ENST00000620884 64 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PCDH17O14917 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 HSPA8P17-201ENST00000427029 1382 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 AC111188.2-201ENST00000529697 1387 ntBASIC5.28□□□□□ -1.56
PCDH17O14917 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.28□□□□□ -1.56
PCDH17O14917 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCDH17O14917 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.27□□□□□ -1.57
PCDH17O14917 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH17O14917 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH17O14917 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PCDH17O14917 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PCDH17O14917 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms