Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SOX1O00570 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX1O00570 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
SOX1O00570 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.72□□□□□ -1.33
SOX1O00570 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
SOX1O00570 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SOX1O00570 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.71□□□□□ -1.33
SOX1O00570 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SOX1O00570 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.71□□□□□ -1.33
SOX1O00570 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
SOX1O00570 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SOX1O00570 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
SOX1O00570 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
SOX1O00570 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SOX1O00570 LINC01963-201ENST00000562038 3148 ntBASIC6.71□□□□□ -1.34
SOX1O00570 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
SOX1O00570 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
SOX1O00570 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SOX1O00570 AC114786.1-201ENST00000512892 1415 ntBASIC6.71□□□□□ -1.34
SOX1O00570 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SOX1O00570 RNU6-1339P-201ENST00000363574 91 ntBASIC6.71□□□□□ -1.34
SOX1O00570 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 AL590762.1-201ENST00000391782 432 ntBASIC6.71□□□□□ -1.34
SOX1O00570 AC005042.1-201ENST00000393397 800 ntBASIC6.71□□□□□ -1.34
SOX1O00570 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.71□□□□□ -1.34
SOX1O00570 RNU2-65P-201ENST00000410162 185 ntBASIC6.71□□□□□ -1.34
SOX1O00570 RNU6-77P-201ENST00000410554 91 ntBASIC6.71□□□□□ -1.34
SOX1O00570 RNU2-42P-201ENST00000410697 113 ntBASIC6.71□□□□□ -1.34
SOX1O00570 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.71□□□□□ -1.34
SOX1O00570 BMS1P17-202ENST00000416720 316 ntBASIC6.71□□□□□ -1.34
SOX1O00570 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 AC007742.1-201ENST00000425789 329 ntBASIC6.71□□□□□ -1.34
SOX1O00570 AP001324.1-201ENST00000428553 399 ntBASIC6.71□□□□□ -1.34
SOX1O00570 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.71□□□□□ -1.34
SOX1O00570 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.71□□□□□ -1.34
SOX1O00570 ELOCP26-201ENST00000436067 329 ntBASIC6.71□□□□□ -1.34
SOX1O00570 UBE2FP3-201ENST00000436366 524 ntBASIC6.71□□□□□ -1.34
SOX1O00570 RPS26P30-201ENST00000443431 335 ntBASIC6.71□□□□□ -1.34
SOX1O00570 FTLP8-201ENST00000446770 267 ntBASIC6.71□□□□□ -1.34
SOX1O00570 SNRPFP4-201ENST00000456366 242 ntBASIC6.71□□□□□ -1.34
SOX1O00570 HMGN1P10-201ENST00000474557 553 ntBASIC6.71□□□□□ -1.34
SOX1O00570 LARP1BP2-201ENST00000486594 519 ntBASIC6.71□□□□□ -1.34
SOX1O00570 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.71□□□□□ -1.34
SOX1O00570 AC109481.1-201ENST00000509173 282 ntBASIC6.71□□□□□ -1.34
SOX1O00570 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.71□□□□□ -1.34
SOX1O00570 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.71□□□□□ -1.34
SOX1O00570 PCNAP4-201ENST00000532690 730 ntBASIC6.71□□□□□ -1.34
SOX1O00570 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.71□□□□□ -1.34
SOX1O00570 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.71□□□□□ -1.34
SOX1O00570 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.71□□□□□ -1.34
SOX1O00570 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.71□□□□□ -1.34
SOX1O00570 AC010680.3-201ENST00000604215 520 ntBASIC6.71□□□□□ -1.34
SOX1O00570 AC005084.1-201ENST00000605160 304 ntBASIC6.71□□□□□ -1.34
SOX1O00570 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.71□□□□□ -1.34
SOX1O00570 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.71□□□□□ -1.34
SOX1O00570 AC073348.1-201ENST00000623002 331 ntBASIC6.71□□□□□ -1.34
SOX1O00570 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.71□□□□□ -1.34
SOX1O00570 FER-210ENST00000628534 558 ntTSL 5 BASIC6.71□□□□□ -1.34
SOX1O00570 AL161756.3-201ENST00000641216 2071 ntBASIC6.71□□□□□ -1.34
SOX1O00570 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
SOX1O00570 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SOX1O00570 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.71□□□□□ -1.34
SOX1O00570 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SOX1O00570 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SOX1O00570 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SOX1O00570 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
SOX1O00570 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.7□□□□□ -1.34
SOX1O00570 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.7□□□□□ -1.34
SOX1O00570 AC011447.7-201ENST00000624228 1590 ntBASIC6.7□□□□□ -1.34
SOX1O00570 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SOX1O00570 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.7□□□□□ -1.34
SOX1O00570 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SOX1O00570 RNU6-1263P-201ENST00000384601 106 ntBASIC6.7□□□□□ -1.34
SOX1O00570 Y_RNA.535-201ENST00000384612 99 ntBASIC6.7□□□□□ -1.34
SOX1O00570 HMGB1P20-201ENST00000402555 677 ntBASIC6.7□□□□□ -1.34
SOX1O00570 RPL26P29-201ENST00000415623 438 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX1O00570 AL662874.1-201ENST00000426065 230 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AL136231.1-201ENST00000429407 730 ntBASIC6.7□□□□□ -1.34
SOX1O00570 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.7□□□□□ -1.34
SOX1O00570 PSMD10P3-201ENST00000437000 448 ntBASIC6.7□□□□□ -1.34
SOX1O00570 OR3D1P-201ENST00000438288 955 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AL450263.2-201ENST00000439400 589 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.7□□□□□ -1.34
SOX1O00570 AL034399.1-201ENST00000451535 380 ntBASIC6.7□□□□□ -1.34
SOX1O00570 AL122020.1-201ENST00000472287 459 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms