Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC188H7C350 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
CCDC188H7C350 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CCDC188H7C350 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC188H7C350 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC188H7C350 MIR320B1-201ENST00000390209 79 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 RNA5SP372-201ENST00000390836 115 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 AL080315.1-201ENST00000406055 466 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC188H7C350 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC188H7C350 RPL21P108-201ENST00000413857 481 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 OR6C64P-201ENST00000419708 825 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 DPY19L1P2-201ENST00000426647 915 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 RPL7L1P9-201ENST00000431298 745 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC188H7C350 FHP1-201ENST00000442741 703 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC188H7C350 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC188H7C350 RPL31P15-201ENST00000449770 338 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 MTND2P30-201ENST00000456663 382 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 SETP20-201ENST00000457046 852 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC188H7C350 RN7SL591P-201ENST00000496150 292 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC188H7C350 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC188H7C350 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC188H7C350 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC188H7C350 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC188H7C350 AL450270.1-201ENST00000606160 391 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC188H7C350 AC127024.6-201ENST00000621598 424 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 AC099494.2-201ENST00000623371 978 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC188H7C350 AL596275.2-204ENST00000641628 552 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 AL596275.2-206ENST00000641957 626 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 SMG1P6-201ENST00000532337 2930 ntBASIC5.04□□□□□ -1.6
CCDC188H7C350 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC188H7C350 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC188H7C350 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC188H7C350 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC188H7C350 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CCDC188H7C350 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CCDC188H7C350 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC188H7C350 RN7SKP104-201ENST00000362605 328 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 U3.2-201ENST00000362981 210 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 RNU1-20P-201ENST00000363314 162 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 AL357515.1-201ENST00000402967 542 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 RNA5SP296-201ENST00000410523 111 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 RN7SKP126-201ENST00000411143 300 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC188H7C350 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC188H7C350 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC188H7C350 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 AC092691.2-201ENST00000461787 803 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 RPL23AP65-201ENST00000475608 468 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 RN7SL184P-201ENST00000488308 297 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 COX6B1P5-201ENST00000509843 249 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC188H7C350 AC108471.1-201ENST00000513977 287 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 RNA5SP43-201ENST00000516559 110 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 snoU109.6-201ENST00000516831 118 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 OR7E128P-201ENST00000532736 1024 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC188H7C350 CYCSP28-201ENST00000534284 321 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC188H7C350 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 AC090022.1-201ENST00000546569 311 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 AC012146.2-201ENST00000576545 416 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 SS18L2P2-201ENST00000583960 235 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC188H7C350 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC188H7C350 AC025016.1-201ENST00000616746 682 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 AC020923.1-201ENST00000624021 917 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 AL356094.1-201ENST00000624663 1212 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 AL353662.3-201ENST00000625131 237 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 MIR4302-201ENST00000638058 60 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 AC083843.2-201ENST00000568248 6253 ntBASIC5.03□□□□□ -1.6
CCDC188H7C350 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC188H7C350 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC188H7C350 SAMMSON-213ENST00000641336 1521 ntBASIC5.02□□□□□ -1.61
CCDC188H7C350 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC188H7C350 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC188H7C350 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC188H7C350 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC188H7C350 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC188H7C350 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
CCDC188H7C350 TMSB4XP4-201ENST00000323496 618 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms