Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA6Q9Y5G7 MTND5P31-201ENST00000419366 1374 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 MIR375-201ENST00000362103 64 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 SKINT1L-201ENST00000401057 817 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC016739.1-201ENST00000405359 345 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 NPM1P40-201ENST00000412758 733 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL450992.3-201ENST00000413192 568 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL354890.1-201ENST00000413730 346 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL365203.2-201ENST00000423444 196 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC009784.1-201ENST00000426484 460 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 SEPT7P5-201ENST00000434048 306 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 PPIAP13-201ENST00000434706 478 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 MTCYBP34-201ENST00000439552 670 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 BMS1P10-201ENST00000443754 1120 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 REG1CP-206ENST00000447469 496 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 RPL21P134-201ENST00000453468 483 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 RN7SL177P-201ENST00000476596 299 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC124945.1-201ENST00000485133 188 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC083795.1-201ENST00000491760 320 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC005912.1-201ENST00000495392 255 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL136038.1-201ENST00000497246 351 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 CCDC11P1-201ENST00000503137 1162 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 MTCYBP16-201ENST00000509187 1129 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 RNA5SP135-201ENST00000517019 125 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC005832.3-201ENST00000537929 631 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL442163.2-201ENST00000553912 710 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL049779.3-201ENST00000557141 606 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 MIR3176-201ENST00000582210 90 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC004223.2-201ENST00000590309 544 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC025857.2-201ENST00000602711 238 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL031281.1-201ENST00000604049 488 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL158042.1-201ENST00000605338 460 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC080013.3-201ENST00000606839 578 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL451074.6-201ENST00000608512 729 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC022467.1-201ENST00000614738 749 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC009318.3-201ENST00000616916 503 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AP005431.1-201ENST00000618479 319 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC067852.7-201ENST00000623270 535 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC103706.2-201ENST00000638080 240 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC009313.2-201ENST00000417893 1941 ntBASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA6Q9Y5G7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 AC134882.1-201ENST00000603738 1676 ntBASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.66□□□□□ -1.5
PCDHGA6Q9Y5G7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms