Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AL592114.1-201ENST00000403842 483 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 TCEA1P2-201ENST00000420496 906 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 CCRL1P1-201ENST00000449542 1053 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AL162739.1-201ENST00000450606 307 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 MTND6P32-201ENST00000457611 483 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RPL21P16-201ENST00000495531 483 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC093755.1-201ENST00000512950 1023 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RN7SKP98-201ENST00000517070 156 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC006115.2-201ENST00000596823 202 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 MFSD13B-201ENST00000420133 1290 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ATP5HP2-201ENST00000433885 485 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 SCAND3P1-201ENST00000439854 1060 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC092641.1-201ENST00000440229 772 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 TCP11X3P-202ENST00000514289 1254 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ERCC6-202ENST00000374127 1782 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RN7SKP156-201ENST00000410308 342 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 RNA5SP246-201ENST00000458909 119 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 MIR4524B-201ENST00000581569 115 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 MIR7106-201ENST00000612419 65 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 PCAT14-202ENST00000627127 3935 ntBASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC1.83□□□□□ -2.12
MACF1Q9UPN3 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 RNU11-4P-201ENST00000391149 133 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 LRRC37BP1-201ENST00000398851 714 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 REREP1Y-201ENST00000422655 198 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 HSPD1P21-201ENST00000436541 245 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 REREP2Y-201ENST00000439103 200 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC104058.1-201ENST00000448028 297 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC027455.1-201ENST00000574104 594 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL450345.1-202ENST00000605741 3881 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 Y_RNA.374-201ENST00000365606 101 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL691449.1-201ENST00000426570 421 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC093853.1-201ENST00000515689 483 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC002069.2-201ENST00000603580 883 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC093849.1-201ENST00000563631 2209 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 EIF2AP4-201ENST00000424793 1781 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 RPS29P4-201ENST00000414733 161 ntBASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
MACF1Q9UPN3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms