Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AL359219.2-201ENST00000555184 348 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC093249.4-201ENST00000564755 259 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 UBE2FP2-201ENST00000566646 462 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 RN7SL802P-201ENST00000577858 299 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC133794.1-201ENST00000602731 914 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC100827.5-201ENST00000615883 426 ntBASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.2□□□□□ -1.58
SIX4Q9UIU6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 SNORD115-48-201ENST00000364764 76 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 VN1R37P-201ENST00000419096 748 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 LINC00993-201ENST00000420453 540 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 MORF4L1P7-201ENST00000426038 703 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC092162.1-201ENST00000432828 434 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 RPS17P8-201ENST00000434525 335 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 CABYRP1-201ENST00000465493 1045 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 TPT1P8-201ENST00000510120 555 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC110760.3-202ENST00000515177 371 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AL671862.1-201ENST00000515851 349 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 SCARNA1-201ENST00000517138 166 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 RNU6-709P-201ENST00000517257 104 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 BUD31P1-201ENST00000521828 359 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 MIR5699-201ENST00000578903 90 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 SNORA74C-1-201ENST00000580726 201 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC008147.4-201ENST00000617570 1204 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC090772.4-201ENST00000623599 362 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC090506.2-201ENST00000624521 419 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 AC104623.2-202ENST00000623477 4002 ntBASIC5.19□□□□□ -1.58
SIX4Q9UIU6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SIX4Q9UIU6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 TLK1P1-201ENST00000456760 2440 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 RNU6-609P-201ENST00000365459 107 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 SEPT7P8-201ENST00000413308 775 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 ZNF965P-201ENST00000432501 817 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 NRBF2P3-201ENST00000432731 865 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 MTND2P21-201ENST00000436242 1042 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 CYCSP11-201ENST00000436426 315 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AL513321.1-201ENST00000441175 761 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC105918.1-201ENST00000474399 838 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 MTCO2P9-201ENST00000503214 694 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC138701.1-201ENST00000524329 714 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 EIF4A2P5-201ENST00000529914 499 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC006116.7-201ENST00000590141 756 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC008536.1-201ENST00000602872 669 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AL512782.1-201ENST00000603093 364 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AF129408.1-201ENST00000608767 431 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 FAM27B-201ENST00000610601 213 ntBASIC5.18□□□□□ -1.58
SIX4Q9UIU6 AC025016.1-201ENST00000616746 682 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms