Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC098583.1-201ENST00000480875 255 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 OR51K1P-201ENST00000510214 950 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AC020937.1-201ENST00000519677 1013 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 ELOCP28-201ENST00000590044 317 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AP001542.1-201ENST00000591314 200 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AC067838.1-201ENST00000606064 577 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AC015804.1-201ENST00000622935 435 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 AL445487.1-201ENST00000415694 1580 ntBASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMG20BQ9P0W2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 RAB9AP4-201ENST00000415230 609 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 RPEP3-201ENST00000425462 676 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC068287.1-201ENST00000430283 295 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AL445433.1-201ENST00000457507 257 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 SEPT14P1-201ENST00000458703 648 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC112206.1-201ENST00000468416 477 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 MTND4LP2-201ENST00000502312 285 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC092593.2-201ENST00000513866 913 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 RN7SKP46-201ENST00000515942 234 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC011270.1-201ENST00000558606 583 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 RNF138P2-201ENST00000603490 592 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 OR51C1P-201ENST00000608504 942 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC004232.3-201ENST00000622977 525 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC011815.3-201ENST00000624194 473 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC026523.2-201ENST00000625039 7739 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 OR9K1P-202ENST00000641111 3217 ntBASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20BQ9P0W2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 AC010132.2-201ENST00000295493 1043 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 RNU6-249P-201ENST00000363016 102 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 RNU1-83P-201ENST00000363426 164 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 RPS27AP7-201ENST00000422792 455 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 CENPIP1-201ENST00000425713 902 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 RPL34P6-201ENST00000432390 345 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 CYCSP42-201ENST00000450823 238 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 snoU13.1-201ENST00000459157 104 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 AK3P4-201ENST00000504283 583 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 AP002981.1-201ENST00000517692 975 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 RAB9BP1-201ENST00000519581 626 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 AL121839.1-201ENST00000556233 1185 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 MIR5096-201ENST00000583713 70 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 MIR4715-201ENST00000584117 79 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 AC020915.5-201ENST00000596836 964 ntBASIC5.68□□□□□ -1.5
HMG20BQ9P0W2 OR7A19P-201ENST00000608051 733 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms