Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 RNA5SP446-201ENST00000515955 82 ntBASIC4.23□□□□□ -1.73
HMG20AQ9NP66 NPM1P6-201ENST00000521088 871 ntBASIC4.23□□□□□ -1.73
HMG20AQ9NP66 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 SNORA74C-1-201ENST00000580726 201 ntBASIC4.23□□□□□ -1.73
HMG20AQ9NP66 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.23□□□□□ -1.73
HMG20AQ9NP66 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.23□□□□□ -1.73
HMG20AQ9NP66 AL138721.1-201ENST00000616756 179 ntBASIC4.23□□□□□ -1.73
HMG20AQ9NP66 AL591926.8-201ENST00000616876 211 ntBASIC4.23□□□□□ -1.73
HMG20AQ9NP66 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 AC105074.1-201ENST00000623380 3095 ntBASIC4.23□□□□□ -1.73
HMG20AQ9NP66 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HMG20AQ9NP66 ZNF733P-202ENST00000444809 1573 ntBASIC4.23□□□□□ -1.73
HMG20AQ9NP66 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AL450326.2-201ENST00000421913 1962 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 RNA5SP435-201ENST00000364044 108 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 RN7SKP206-201ENST00000410823 293 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 GAPDHP49-201ENST00000421421 961 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AL391219.1-201ENST00000422570 483 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 IPMKP1-201ENST00000425988 855 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 NFYAP1-201ENST00000431953 972 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AL451139.1-201ENST00000434718 346 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 FAR2P1-206ENST00000449736 709 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 IGHV5-78-201ENST00000450948 295 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC092647.2-201ENST00000452998 253 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC090013.1-201ENST00000485147 480 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 UBA52P7-201ENST00000486088 380 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC106872.4-201ENST00000510050 523 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 RNU6-709P-201ENST00000517257 104 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 BUD31P1-201ENST00000521828 359 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 UBTFL9-201ENST00000534504 1148 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 NMNAT1P1-201ENST00000554095 876 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC004825.1-201ENST00000555068 586 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC105254.2-201ENST00000603636 436 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AP000864.1-201ENST00000609424 650 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 MIR4302-201ENST00000638058 60 ntBASIC4.22□□□□□ -1.73
HMG20AQ9NP66 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMG20AQ9NP66 AC233968.1-201ENST00000611212 1300 ntBASIC4.21□□□□□ -1.73
HMG20AQ9NP66 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HMG20AQ9NP66 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.21□□□□□ -1.73
HMG20AQ9NP66 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HMG20AQ9NP66 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HMG20AQ9NP66 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.21□□□□□ -1.73
HMG20AQ9NP66 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMG20AQ9NP66 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMG20AQ9NP66 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HMG20AQ9NP66 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMG20AQ9NP66 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMG20AQ9NP66 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMG20AQ9NP66 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HMG20AQ9NP66 AL391361.1-201ENST00000405580 489 ntBASIC4.21□□□□□ -1.74
HMG20AQ9NP66 JKAMPP1-201ENST00000413804 919 ntBASIC4.21□□□□□ -1.74
HMG20AQ9NP66 AL355994.1-201ENST00000424379 260 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms