Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC108043.1-201ENST00000512696 574 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC092709.1-201ENST00000521355 1045 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 C1DP5-201ENST00000525775 383 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 MRPS36P5-201ENST00000551909 298 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC091057.2-201ENST00000602594 792 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AP002791.1-201ENST00000623291 381 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AP003499.2-201ENST00000624100 483 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 CASC19-255ENST00000641733 1385 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 NXF4-202ENST00000416098 1465 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 MTCO1P7-201ENST00000419523 1542 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC100757.1-201ENST00000616872 1835 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AC104260.2-201ENST00000623551 3497 ntBASIC5.36□□□□□ -1.55
EBF3Q9H4W6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
EBF3Q9H4W6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 IRF5P1-201ENST00000504852 2164 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 RNU6-40P-201ENST00000384254 107 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 OR8V1P-201ENST00000395193 873 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 CYB5AP4-201ENST00000396692 399 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AL589994.1-201ENST00000404962 340 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 RPL26P29-201ENST00000415623 438 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 COX6B1P1-201ENST00000415962 213 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 OR2AM1P-201ENST00000422137 422 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 DDX39BP1-205ENST00000422507 192 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 MTND4P24-201ENST00000424002 397 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 MTND5P25-201ENST00000430499 799 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC007000.2-201ENST00000442564 487 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AL009048.1-201ENST00000450437 298 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 TPT1P1-201ENST00000458495 518 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC021660.1-201ENST00000465006 554 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC104164.3-201ENST00000467363 1258 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 RPS29P22-201ENST00000472363 168 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 RPL7P16-201ENST00000479738 738 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AL049874.2-201ENST00000492636 288 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 RN7SKP260-201ENST00000516907 149 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 MTATP6P15-201ENST00000527233 835 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 MIR3936-201ENST00000584304 110 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC087283.1-201ENST00000604029 1074 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC122108.2-201ENST00000611946 526 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AL627230.1-201ENST00000613077 211 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AL591926.8-201ENST00000616876 211 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 AC091932.2-201ENST00000623014 291 ntBASIC5.35□□□□□ -1.55
EBF3Q9H4W6 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
EBF3Q9H4W6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
EBF3Q9H4W6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms