Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC087465.1-201ENST00000560574 245 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AL392112.1-201ENST00000605115 829 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC080013.3-201ENST00000606839 578 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC108673.3-201ENST00000609183 335 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 MIR6809-201ENST00000612189 116 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC092608.3-201ENST00000625017 386 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AC000367.1-201ENST00000452711 1766 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 OR9K1P-202ENST00000641111 3217 ntBASIC5.31□□□□□ -1.56
AMBRA1Q9C0C7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC011503.2-201ENST00000594230 1500 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 RNU6-543P-201ENST00000362576 108 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AL079342.2-201ENST00000403367 482 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC016739.1-201ENST00000405359 345 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC096921.1-201ENST00000411661 375 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC013404.1-201ENST00000413068 249 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC011233.1-201ENST00000422812 283 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 MTND1P20-201ENST00000430341 950 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 YWHAEP5-201ENST00000431545 765 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 ATP5LP2-201ENST00000440646 311 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 MTND5P2-201ENST00000442927 1142 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 MTND2P4-201ENST00000445034 1004 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC073109.1-201ENST00000445066 978 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC073387.1-201ENST00000453261 709 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 GEMIN2P1-201ENST00000454246 752 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 RPL31P3-201ENST00000458430 332 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 PSAT1P4-201ENST00000466500 526 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 MTND4LP3-201ENST00000468320 276 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 RPL35AP19-201ENST00000469425 329 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 DUTP1-201ENST00000493631 470 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC084024.2-201ENST00000503480 791 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC111000.2-201ENST00000507775 550 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 XKRY-201ENST00000510392 1100 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 RN7SKP238-201ENST00000516483 249 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 IGLV2-28-201ENST00000520681 304 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC135628.1-201ENST00000568867 534 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AL031601.1-201ENST00000605702 394 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AL136131.3-201ENST00000607600 188 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC007342.8-201ENST00000623278 678 ntBASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AMBRA1Q9C0C7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms