Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AF001550.2-201ENST00000636643 217 ntBASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 SPATA2P1-201ENST00000431223 2055 ntBASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 SEC63P2-201ENST00000503863 1939 ntBASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
FOXP3Q9BZS1 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 OR4G2P-201ENST00000328113 903 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 RPS15AP38-201ENST00000413110 372 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 DPPA2P2-201ENST00000418220 897 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 RNGTTP1-201ENST00000420965 728 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 OSTCP4-201ENST00000424397 449 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC104651.1-201ENST00000427559 735 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC069154.1-201ENST00000432914 542 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 USP24P1-201ENST00000433802 779 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AL138787.1-202ENST00000437804 898 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 EIF5AP4-201ENST00000441206 465 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 VN1R34P-201ENST00000447387 883 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC006499.4-201ENST00000510947 694 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 RNU6-528P-201ENST00000516926 100 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 TPM3P3-201ENST00000521343 354 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 NPIPB14P-203ENST00000532298 987 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 RPS3AP4-201ENST00000555161 764 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC084757.1-201ENST00000559987 490 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC092325.1-201ENST00000566449 554 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 SLC25A36P1-201ENST00000590111 465 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AP002360.3-201ENST00000607673 710 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AC023158.2-201ENST00000614876 543 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 AL136981.2-201ENST00000617319 734 ntBASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXP3Q9BZS1 PDZK1P1-202ENST00000425209 1350 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 AP001284.1-201ENST00000528393 2118 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 RNU4-91P-201ENST00000364778 135 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 SNORA77.2-201ENST00000408571 112 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 RNA5SP198-201ENST00000410376 127 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 RPL7AP14-201ENST00000424041 802 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 MTND1P2-201ENST00000430604 821 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 AC008072.1-201ENST00000434254 824 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 RPS3AP38-201ENST00000435889 763 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 AC234064.1-201ENST00000436312 247 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 AC122718.1-201ENST00000439448 744 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 CNOT7P2-201ENST00000441051 832 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 FAR2P1-206ENST00000449736 709 ntBASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FOXP3Q9BZS1 RPL36AP33-201ENST00000450395 310 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms