Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.53□□□□□ -1.36
SIN3AQ96ST3 AC012409.3-201ENST00000611343 981 ntBASIC6.53□□□□□ -1.36
SIN3AQ96ST3 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.53□□□□□ -1.36
SIN3AQ96ST3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SIN3AQ96ST3 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.53□□□□□ -1.36
SIN3AQ96ST3 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.53□□□□□ -1.36
SIN3AQ96ST3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SIN3AQ96ST3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SIN3AQ96ST3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.53□□□□□ -1.36
SIN3AQ96ST3 MAPK10-304ENST00000641341 3984 ntBASIC6.53□□□□□ -1.36
SIN3AQ96ST3 NXPH1-205ENST00000602349 1953 ntBASIC6.53□□□□□ -1.36
SIN3AQ96ST3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.53□□□□□ -1.36
SIN3AQ96ST3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SIN3AQ96ST3 AL449283.1-201ENST00000602631 3403 ntBASIC6.53□□□□□ -1.36
SIN3AQ96ST3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6.53□□□□□ -1.36
SIN3AQ96ST3 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 AC139769.1-204ENST00000472297 1931 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 RNU4-39P-201ENST00000362455 127 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 RNU1-32P-201ENST00000363937 159 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 RNU1-63P-201ENST00000383902 164 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 NPM1P10-201ENST00000398310 865 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 MIR921-201ENST00000401133 56 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 AL359643.1-201ENST00000404109 423 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 CDY14P-201ENST00000431260 1014 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 CDY12P-201ENST00000440679 1015 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 CDY13P-201ENST00000445813 1015 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 CDY23P-201ENST00000451661 1014 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 AC012671.1-201ENST00000451912 203 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 RN7SL346P-201ENST00000491561 294 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 AC125494.2-201ENST00000602431 657 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 AL160290.3-201ENST00000604869 165 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 AC100814.1-201ENST00000606963 623 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 AP000550.3-201ENST00000637734 379 ntBASIC6.52□□□□□ -1.37
SIN3AQ96ST3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.52□□□□□ -1.37
SIN3AQ96ST3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 RN7SKP115-201ENST00000363177 317 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 EI24P3-201ENST00000399046 1062 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC013356.1-201ENST00000489027 564 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AP001960.1-201ENST00000506494 658 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC025857.1-201ENST00000525252 377 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AP000827.1-201ENST00000527814 258 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC068993.1-201ENST00000546724 589 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC234775.3-201ENST00000564612 656 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 BPIFA4P-203ENST00000603168 689 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC010201.1-201ENST00000605051 540 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AL121873.1-201ENST00000616013 524 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 MUC2-202ENST00000613187 4845 ntBASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SIN3AQ96ST3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 OR56B2P-202ENST00000641377 2453 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 FAM3C2-201ENST00000312214 681 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AL583835.1-201ENST00000399570 407 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 RPS3AP23-201ENST00000401762 784 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.5□□□□□ -1.37
SIN3AQ96ST3 snoU13.1-201ENST00000459157 104 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 RPS27AP17-201ENST00000463344 455 ntBASIC6.5□□□□□ -1.37
SIN3AQ96ST3 RPS23P1-201ENST00000491662 432 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms