Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 ZNF849P-201ENST00000594711 1566 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 AP001029.2-203ENST00000589795 4910 ntBASIC6□□□□□ -1.45
CDK5RAP3Q96JB5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 RNU4-31P-201ENST00000384211 141 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC009804.1-201ENST00000400949 179 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 SNORA11.3-201ENST00000408471 128 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 OR3A2-201ENST00000408891 1076 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 RN7SKP59-201ENST00000410520 314 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 RN7SKP222-201ENST00000410651 315 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AL449283.1-202ENST00000418249 604 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AL121776.1-201ENST00000429337 372 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 FAM96AP1-201ENST00000430879 482 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 CASP3P1-201ENST00000446037 609 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 TRY2P-201ENST00000448860 689 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 NPM1P39-201ENST00000449818 867 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AL591623.2-201ENST00000449978 222 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC002553.2-201ENST00000453217 340 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 GTF2IP12-201ENST00000456547 356 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 PRELID3BP5-201ENST00000508612 460 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 MORF4L1P3-201ENST00000525966 950 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 YWHABP2-201ENST00000540201 713 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AL109741.3-201ENST00000561748 592 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 SULT1C2P2-201ENST00000562517 294 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC027455.1-201ENST00000574104 594 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC012146.2-201ENST00000576545 416 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC011445.2-201ENST00000599274 173 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 SNORA11.6-201ENST00000619030 128 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC024023.1-201ENST00000624530 922 ntBASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP3Q96JB5 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 OR9G4-201ENST00000302957 984 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 RNA5SP132-201ENST00000364725 118 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 OR1L6-202ENST00000373684 1044 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 RPL7P27-201ENST00000403775 720 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 OR4K12P-201ENST00000406538 961 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 USP9YP21-201ENST00000420603 432 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC124944.2-201ENST00000429866 1242 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 USP9YP24-201ENST00000434374 697 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 OR10R1P-201ENST00000441524 1141 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 USP9YP17-201ENST00000444617 696 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 CBX1P2-201ENST00000453841 458 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC079168.1-201ENST00000458741 345 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 SNORD11.1-201ENST00000459482 85 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AL133445.1-201ENST00000467051 452 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC058823.1-201ENST00000485315 474 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC011411.1-201ENST00000509592 876 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC093752.1-206ENST00000511823 336 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 BX510359.5-201ENST00000515651 304 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 MTND3P12-201ENST00000559068 328 ntBASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.98□□□□□ -1.45
CDK5RAP3Q96JB5 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms