Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
LRCH3Q96II8 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LRCH3Q96II8 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
LRCH3Q96II8 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.84□□□□□ -1.16
LRCH3Q96II8 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 DBF4P1-201ENST00000412976 1892 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 RNU5E-1-201ENST00000362477 120 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 Y_RNA.153-201ENST00000363615 91 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 RBMY2KP-201ENST00000418221 992 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC114814.2-201ENST00000419195 485 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC000089.1-201ENST00000424559 801 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC003989.1-201ENST00000434569 565 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 HMGB3P10-201ENST00000434734 572 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 AL353754.1-201ENST00000440219 340 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC107399.1-201ENST00000451226 265 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 RPL30P15-201ENST00000457129 321 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC093878.1-201ENST00000515630 432 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 Y_RNA.665-201ENST00000516177 98 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 Y_RNA.682-201ENST00000516457 100 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 IGLVIV-59-201ENST00000520218 250 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 MRPS16P1-201ENST00000523462 412 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AL359704.2-201ENST00000604335 521 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 ATP1B3P1-201ENST00000605365 821 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC007485.1-201ENST00000616755 206 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 MRPL57P3-201ENST00000619218 176 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC104964.2-201ENST00000562242 4641 ntBASIC7.83□□□□□ -1.16
LRCH3Q96II8 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
LRCH3Q96II8 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LRCH3Q96II8 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 MAPK10-377ENST00000642006 2752 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AP004289.2-201ENST00000444413 1457 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 Y_RNA.364-201ENST00000365532 101 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 MIR548K-201ENST00000408406 116 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 RN7SKP266-201ENST00000410232 287 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 RPLP1P10-201ENST00000413972 339 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC018865.2-201ENST00000423631 129 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC093151.1-201ENST00000427711 313 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 RPL21P110-201ENST00000433345 446 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 RPL7P29-201ENST00000437151 728 ntBASIC7.82□□□□□ -1.16
LRCH3Q96II8 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.82□□□□□ -1.16
LRCH3Q96II8 AL031736.1-201ENST00000449688 618 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms