Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
HLA-CQ95604 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-CQ95604 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC7.47□□□□□ -1.21
HLA-CQ95604 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-CQ95604 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
HLA-CQ95604 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HLA-CQ95604 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
HLA-CQ95604 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
HLA-CQ95604 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.46□□□□□ -1.21
HLA-CQ95604 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HLA-CQ95604 RNF6P1-201ENST00000444889 1784 ntBASIC7.46□□□□□ -1.21
HLA-CQ95604 OR2AH1P-202ENST00000641232 2744 ntBASIC7.46□□□□□ -1.21
HLA-CQ95604 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.46□□□□□ -1.21
HLA-CQ95604 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
HLA-CQ95604 AL359263.1-201ENST00000441188 2796 ntBASIC7.46□□□□□ -1.21
HLA-CQ95604 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
HLA-CQ95604 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
HLA-CQ95604 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.46□□□□□ -1.22
HLA-CQ95604 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.46□□□□□ -1.22
HLA-CQ95604 RNU4-1-201ENST00000363925 141 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 RNU6-169P-201ENST00000365336 107 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.46□□□□□ -1.22
HLA-CQ95604 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
HLA-CQ95604 RNU6-1106P-201ENST00000390845 107 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 MIR548F4-201ENST00000408515 105 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC7.46□□□□□ -1.22
HLA-CQ95604 MYL6P3-201ENST00000436904 432 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.46□□□□□ -1.22
HLA-CQ95604 AC073909.1-201ENST00000447112 999 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC104651.2-201ENST00000447549 528 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 BTF3P15-201ENST00000455606 336 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AKR1D1P1-201ENST00000457236 936 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC117395.2-201ENST00000463122 1128 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 RPS15AP17-201ENST00000470598 390 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC104563.1-201ENST00000476147 376 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.46□□□□□ -1.22
HLA-CQ95604 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC7.46□□□□□ -1.22
HLA-CQ95604 AC024558.1-201ENST00000505008 528 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.46□□□□□ -1.22
HLA-CQ95604 RN7SKP283-201ENST00000517197 270 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC090572.1-201ENST00000519251 160 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC7.46□□□□□ -1.22
HLA-CQ95604 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.46□□□□□ -1.22
HLA-CQ95604 OR4T1P-201ENST00000554933 911 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC068831.4-201ENST00000556118 109 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 UBE2CP1-201ENST00000557130 554 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.46□□□□□ -1.22
HLA-CQ95604 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC7.46□□□□□ -1.22
HLA-CQ95604 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.46□□□□□ -1.22
HLA-CQ95604 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
HLA-CQ95604 uc_338.22-201ENST00000622722 187 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC079597.1-201ENST00000624306 508 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 MTND4LP32-201ENST00000636111 270 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 MIR4302-201ENST00000638058 60 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 AC107021.2-201ENST00000567714 2095 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
HLA-CQ95604 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
HLA-CQ95604 AC114546.3-201ENST00000623582 1734 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC110769.2-201ENST00000602760 1548 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.22
HLA-CQ95604 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.46□□□□□ -1.22
HLA-CQ95604 AL391666.1-201ENST00000442570 2764 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 AC006058.1-201ENST00000568686 5067 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC7.46□□□□□ -1.22
HLA-CQ95604 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
HLA-CQ95604 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
HLA-CQ95604 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-CQ95604 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.46□□□□□ -1.22
HLA-CQ95604 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.46□□□□□ -1.22
HLA-CQ95604 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC009108.3-201ENST00000602739 3515 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-CQ95604 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC104581.5-201ENST00000624171 7141 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HLA-CQ95604 AC036108.4-201ENST00000611654 2516 ntBASIC7.45□□□□□ -1.22
HLA-CQ95604 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms