Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 AC018816.2-201ENST00000621460 353 ntBASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 TCP1P3-201ENST00000414406 1498 ntBASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 AC104260.2-201ENST00000623551 3497 ntBASIC3.09□□□□□ -1.92
ALMS1Q8TCU4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC023271.1-201ENST00000445936 1090 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AL133547.1-201ENST00000448546 220 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 MIR4286-201ENST00000580651 93 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC009093.8-201ENST00000641769 292 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AL442128.2-201ENST00000620246 1824 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AL079305.1-201ENST00000623159 3008 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC116553.2-201ENST00000564203 463 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC006116.5-201ENST00000591936 559 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AL121772.2-201ENST00000614331 297 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AL583835.1-201ENST00000399570 407 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 PRPF38AP1-201ENST00000451976 933 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 RNU6-525P-201ENST00000363685 104 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC008280.1-201ENST00000418851 412 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 E2F6P2-201ENST00000420708 748 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AL136231.1-201ENST00000429407 730 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 ARAFP2-201ENST00000440565 559 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AP000827.1-201ENST00000527814 258 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC022884.2-201ENST00000578535 580 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 BNIP3P19-201ENST00000605397 577 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC091953.5-201ENST00000622919 233 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 AC138965.3-201ENST00000623875 498 ntBASIC3.08□□□□□ -1.92
ALMS1Q8TCU4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 LINC00993-201ENST00000420453 540 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 AC007688.1-201ENST00000475592 759 ntBASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC3.07□□□□□ -1.92
ALMS1Q8TCU4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms