Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 BTF3P13-201ENST00000513224 490 ntBASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC011270.1-201ENST00000558606 583 ntBASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 IMMP1LP1-201ENST00000605170 488 ntBASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AL445222.1-201ENST00000607259 628 ntBASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AP000894.4-201ENST00000610185 483 ntBASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 AC018445.2-201ENST00000622987 260 ntBASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 NCLP2-201ENST00000416078 1462 ntBASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 LINC01109-201ENST00000603837 3081 ntBASIC3.91□□□□□ -1.78
ZNF439Q8NDP4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ZNF439Q8NDP4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ZNF439Q8NDP4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.9□□□□□ -1.78
ZNF439Q8NDP4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
ZNF439Q8NDP4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
ZNF439Q8NDP4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
ZNF439Q8NDP4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 IL6STP1-201ENST00000346911 1020 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 RNU1-94P-201ENST00000362627 173 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 RNU6-984P-201ENST00000363236 109 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 RNU1-83P-201ENST00000363426 164 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 SPTLC1P2-201ENST00000407089 121 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 OR51B3P-201ENST00000412287 913 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 CYCSP10-201ENST00000417973 294 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC007559.1-201ENST00000428736 355 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 NPM1P48-201ENST00000436002 853 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 PSMD10P3-201ENST00000437000 448 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC104651.2-201ENST00000447549 528 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC243772.1-201ENST00000451620 410 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 snoU13.20-201ENST00000459180 104 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 RPL5P30-201ENST00000465511 891 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 RN7SL808P-201ENST00000496066 299 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC147055.3-201ENST00000510547 851 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 RN7SL176P-201ENST00000580352 264 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC087283.1-201ENST00000604029 1074 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AL139041.1-201ENST00000605480 610 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC068870.2-201ENST00000620635 389 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AL355480.1-201ENST00000629041 99 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 AC007382.1-201ENST00000624376 2618 ntBASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF439Q8NDP4 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 SAMMSON-226ENST00000642089 1582 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 AL590762.2-201ENST00000395798 571 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 GTF2IP2-201ENST00000424290 697 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 RPS27P18-201ENST00000431701 247 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 HMGB3P10-201ENST00000434734 572 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 OR52J1P-201ENST00000450596 932 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 RPS5P7-201ENST00000456664 608 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 AC108751.2-201ENST00000469993 231 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 RPS4XP14-201ENST00000493072 781 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 AC104971.1-201ENST00000495117 578 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 SCARNA22-201ENST00000503991 125 ntBASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.89□□□□□ -1.79
ZNF439Q8NDP4 AC091868.1-201ENST00000508746 304 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms