Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDKL3Q8IVW4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AP001002.1-201ENST00000625148 1513 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 SNORA74A-201ENST00000364089 198 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 RNU6-1263P-201ENST00000384601 106 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 Z98745.1-201ENST00000402553 494 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 RNA5SP113-201ENST00000410486 84 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AC097523.2-201ENST00000435551 652 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 CYCSP11-201ENST00000436426 315 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 RPL7P16-201ENST00000479738 738 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AK4P6-201ENST00000505168 528 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 CYCSP28-201ENST00000534284 321 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AP001880.2-201ENST00000538233 448 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 RN7SL652P-201ENST00000577769 300 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 MIR3667-201ENST00000581025 74 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 HMGB2P1-201ENST00000591146 634 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AC016769.4-201ENST00000616893 535 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AC009704.2-201ENST00000618739 483 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AC087385.3-201ENST00000620477 187 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 AC005086.4-201ENST00000623065 213 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 HSPD1P14-201ENST00000432666 1618 ntBASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CDKL3Q8IVW4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AL672167.1-203ENST00000641299 2975 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AC093535.2-201ENST00000624769 2326 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 RNA5SP191-201ENST00000362585 102 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 RN7SKP149-201ENST00000363008 344 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 SNORA51.8-201ENST00000384234 132 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 RNU6-178P-201ENST00000384631 104 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 RSU1P3-201ENST00000412878 835 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 ARL4AP3-201ENST00000441452 574 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AC114982.2-201ENST00000461396 358 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AC063943.1-201ENST00000465434 453 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 UBA52P3-201ENST00000491303 382 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 RPL36AP41-201ENST00000493820 306 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 RNU2-30P-201ENST00000516209 141 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 RPL21P7-201ENST00000557463 483 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 SULT1C2P2-201ENST00000562517 294 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AC091178.1-203ENST00000584586 279 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AL512782.1-201ENST00000603093 364 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AC015849.6-201ENST00000605454 474 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AC016252.1-201ENST00000609721 474 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 Z95327.2-201ENST00000414579 1873 ntBASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDKL3Q8IVW4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 AC005332.5-201ENST00000591222 2919 ntBASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 AC108751.5-201ENST00000492880 1336 ntBASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 EOGT-210ENST00000615922 1931 ntBASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL3Q8IVW4 MIR105-2-201ENST00000385083 81 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms