Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 PPIAP24-201ENST00000328558 471 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 RPL21P132-201ENST00000331267 462 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 STAG3L4-201ENST00000352103 530 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 Y_RNA.67-201ENST00000362870 100 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 SNORD81.2-201ENST00000365153 76 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 MIR191-201ENST00000384873 92 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 ZNF90P2-204ENST00000419323 1075 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 SAR1AP4-201ENST00000429225 591 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 YWHAEP5-201ENST00000431545 765 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 LDHAP2-201ENST00000437325 985 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 MGAT2P1-201ENST00000449718 797 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC021660.1-201ENST00000465006 554 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 RN7SL83P-201ENST00000468131 297 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC015524.1-201ENST00000491585 472 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 PAICSP4-201ENST00000517543 1253 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC116917.1-201ENST00000520558 305 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC084337.1-201ENST00000524809 686 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 YWHABP2-201ENST00000540201 713 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AL359212.1-201ENST00000556608 614 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC137800.2-201ENST00000574375 120 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC006006.1-201ENST00000603082 144 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC087283.1-201ENST00000604029 1074 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 TAS2R6P-201ENST00000605022 826 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 SNORD96A-201ENST00000606577 79 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 Z95327.3-201ENST00000610385 572 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 MIR7854-201ENST00000620068 65 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AP001264.1-201ENST00000620602 703 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 AC005514.1-201ENST00000623521 208 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ATG4DQ86TL0 MTND5P3-201ENST00000438536 1800 ntBASIC5.95□□□□□ -1.46
ATG4DQ86TL0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 CASC19-243ENST00000641588 1546 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 RNU1-5P-201ENST00000362684 144 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 MIR142-201ENST00000384835 87 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AL356432.1-201ENST00000405809 419 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 RNA5SP155-201ENST00000411154 129 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 RNU6-575P-201ENST00000411326 105 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC009310.1-201ENST00000414414 451 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 PDCL2P1-201ENST00000419302 352 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 RPL36P18-201ENST00000419316 318 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 Z82198.3-201ENST00000421145 199 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AL157884.1-201ENST00000424561 454 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 MTCO3P21-201ENST00000430791 643 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC003989.1-201ENST00000434569 565 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 OR52B5P-201ENST00000435337 951 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC233279.1-201ENST00000455300 423 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 RPL38P1-201ENST00000460914 211 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC091544.1-201ENST00000484702 348 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC022415.1-202ENST00000486612 523 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms