Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 RNU4-4P-201ENST00000364588 130 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC007618.1-201ENST00000366455 732 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 RNU6-452P-201ENST00000384406 107 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 HSPD1P12-201ENST00000429127 1069 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 OTX2P1-201ENST00000450956 354 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 RN7SL189P-201ENST00000468631 289 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 MTCO2P9-201ENST00000503214 694 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC004980.4-201ENST00000513375 203 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC092451.2-201ENST00000538746 658 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC022884.3-201ENST00000579571 248 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 BNIP3P32-201ENST00000600015 554 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AF230666.2-201ENST00000602328 725 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC005034.4-201ENST00000603612 899 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC120053.1-201ENST00000607706 736 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 TRIM51GP-201ENST00000534741 1350 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 AC112198.2-201ENST00000426589 6996 ntBASIC5.41□□□□□ -1.54
SNX30Q5VWJ9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 RNU4-44P-201ENST00000363050 141 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 RNU6-252P-201ENST00000363232 107 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AL133270.1-201ENST00000402635 279 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 TRGV6-201ENST00000417928 299 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AC092647.3-201ENST00000443044 633 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 EIF2S2P5-201ENST00000457635 968 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 RPS20P4-201ENST00000461659 355 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AC108471.1-201ENST00000513977 287 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 SNORA31.13-201ENST00000516624 135 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 RN7SKP147-201ENST00000517154 244 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AP006245.2-201ENST00000522004 300 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 CIR1P1-201ENST00000524055 1133 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 MTCYBP13-201ENST00000578634 1093 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 PRPF19P1-201ENST00000584766 898 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AP005432.2-201ENST00000608162 586 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AC093799.2-201ENST00000610062 578 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 MIR6839-201ENST00000620425 113 ntBASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.4□□□□□ -1.54
SNX30Q5VWJ9 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNX30Q5VWJ9 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SNX30Q5VWJ9 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SNX30Q5VWJ9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 AP001642.1-201ENST00000624727 2117 ntBASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNX30Q5VWJ9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms