Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 OR5AK3P-201ENST00000527486 1297 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 OR4A43P-201ENST00000532938 908 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC026422.1-201ENST00000623961 452 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 AC019072.1-201ENST00000604535 1551 ntBASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SLC44A4Q53GD3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 RNA5SP27-201ENST00000363839 119 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 RNU6-452P-201ENST00000384406 107 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 TAS2R15P-201ENST00000390674 928 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 SNORD65C-201ENST00000390962 71 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 RNU6-932P-201ENST00000391108 106 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 RPL7P27-201ENST00000403775 720 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 ZNF885P-201ENST00000420174 1098 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 XKRYP1-201ENST00000423438 492 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 XKRYP2-201ENST00000432915 492 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC006466.1-201ENST00000438721 289 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 Z80107.2-201ENST00000445127 392 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AL035090.1-201ENST00000454835 332 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC004129.2-201ENST00000457229 287 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 TRBV5-2-201ENST00000489095 273 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC109462.1-201ENST00000491087 368 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 MTND4LP2-201ENST00000502312 285 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC105384.2-201ENST00000508433 640 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC021106.1-201ENST00000509020 1058 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 RNU6-1028P-201ENST00000517164 93 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC135279.1-201ENST00000543493 504 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC087897.1-201ENST00000550134 156 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 OR11J2P-201ENST00000555298 907 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AL049779.3-201ENST00000557141 606 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC022022.2-201ENST00000602989 360 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC064807.4-201ENST00000607201 407 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AL355974.3-201ENST00000617383 467 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AP002799.1-201ENST00000623552 423 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AP003399.1-201ENST00000637534 361 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC068137.4-201ENST00000638485 296 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 HSPA8P18-201ENST00000439846 1928 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC011493.1-201ENST00000596753 1632 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 AP001029.2-203ENST00000589795 4910 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC44A4Q53GD3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SLC44A4Q53GD3 AC114774.1-201ENST00000507410 1770 ntBASIC5.72□□□□□ -1.49
SLC44A4Q53GD3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC44A4Q53GD3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms