Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RPL7P55-201ENST00000450522 746 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 LRRC37A14P-201ENST00000452297 462 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN1BQ07699 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.65□□□□□ -1.67
SCN1BQ07699 AP000942.1-201ENST00000463969 747 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AC011476.1-201ENST00000466725 307 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 RPL30P11-201ENST00000495304 339 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.65□□□□□ -1.67
SCN1BQ07699 TCP11X3P-202ENST00000514289 1254 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN1BQ07699 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN1BQ07699 IGKV2-4-201ENST00000523070 340 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN1BQ07699 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SCN1BQ07699 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN1BQ07699 AL136520.1-202ENST00000555494 763 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 HMGB3P26-201ENST00000560051 582 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 MRPS21P7-201ENST00000566937 238 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN1BQ07699 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.65□□□□□ -1.67
SCN1BQ07699 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.65□□□□□ -1.67
SCN1BQ07699 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN1BQ07699 AC005776.1-201ENST00000603164 290 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 RNF138P2-201ENST00000603490 592 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AC018695.5-201ENST00000605872 315 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 OR2BH1P-201ENST00000608850 864 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AL096712.1-201ENST00000614561 159 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.65□□□□□ -1.67
SCN1BQ07699 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.65□□□□□ -1.67
SCN1BQ07699 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SCN1BQ07699 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SCN1BQ07699 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SCN1BQ07699 AC107068.1-201ENST00000563286 4218 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SCN1BQ07699 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SCN1BQ07699 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SCN1BQ07699 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.65□□□□□ -1.67
SCN1BQ07699 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.65□□□□□ -1.67
SCN1BQ07699 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SCN1BQ07699 CASC19-204ENST00000641001 2055 ntBASIC4.65□□□□□ -1.67
SCN1BQ07699 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
SCN1BQ07699 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SCN1BQ07699 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
SCN1BQ07699 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.64□□□□□ -1.67
SCN1BQ07699 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN1BQ07699 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC023490.2-201ENST00000359859 470 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 RNU6-543P-201ENST00000362576 108 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 RN7SKP6-201ENST00000364795 319 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.64□□□□□ -1.67
SCN1BQ07699 LYPLA1P3-201ENST00000402650 695 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 HMGN1P20-201ENST00000411849 300 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AL445183.3-201ENST00000414168 502 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AL662874.1-201ENST00000426065 230 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AL031736.2-201ENST00000426573 787 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AC104843.2-201ENST00000427666 297 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 RPL23AP19-201ENST00000436229 369 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 GAPDHP58-201ENST00000438477 1006 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN1BQ07699 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.64□□□□□ -1.67
SCN1BQ07699 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.64□□□□□ -1.67
SCN1BQ07699 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC090686.1-201ENST00000481577 749 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 RPS3AP15-201ENST00000483874 781 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN1BQ07699 DPPA2P4-201ENST00000563717 878 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AC106734.1-201ENST00000568646 663 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 MIR4512-201ENST00000583257 77 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC069304.3-201ENST00000603938 1084 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AC133552.5-201ENST00000604266 540 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 MIR8084-201ENST00000614105 89 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC095038.2-201ENST00000621464 1070 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 AP003400.3-201ENST00000624904 346 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN1BQ07699 CDRT1-208ENST00000630868 794 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 SCARNA15-201ENST00000607520 4325 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN1BQ07699 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.64□□□□□ -1.67
SCN1BQ07699 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.64□□□□□ -1.67
SCN1BQ07699 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN1BQ07699 AC134882.1-201ENST00000603738 1676 ntBASIC4.64□□□□□ -1.67
SCN1BQ07699 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.64□□□□□ -1.67
SCN1BQ07699 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms