Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC067852.7-201ENST00000623270 535 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC006453.5-201ENST00000636451 619 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 THAP12P4-201ENST00000528321 2266 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 USP9YP4-201ENST00000424401 1745 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 MAPK10-263ENST00000641052 4307 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H1AQ02539 AC011266.1-201ENST00000624119 3569 ntBASIC3.66□□□□□ -1.82
HIST1H1AQ02539 VPS35P1-201ENST00000563400 1518 ntBASIC3.65□□□□□ -1.82
HIST1H1AQ02539 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
HIST1H1AQ02539 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HIST1H1AQ02539 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.65□□□□□ -1.82
HIST1H1AQ02539 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.65□□□□□ -1.82
HIST1H1AQ02539 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HIST1H1AQ02539 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
HIST1H1AQ02539 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 RNU1-83P-201ENST00000363426 164 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 RNA5SP513-201ENST00000364648 118 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AL357515.1-201ENST00000402967 542 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 RN7SKP206-201ENST00000410823 293 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 VDAC1P9-201ENST00000412766 841 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 RAC1P3-201ENST00000416129 580 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 TBCAP2-201ENST00000416175 326 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 BMS1P13-201ENST00000417301 885 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC004552.1-201ENST00000419089 348 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 PPIAP13-201ENST00000434706 478 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC011753.3-201ENST00000443436 406 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 PPIAP20-201ENST00000449839 135 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 NDUFS5P3-201ENST00000450668 321 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 EIF4A1P11-201ENST00000451239 222 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 RPS26P3-201ENST00000470205 348 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 RN7SL222P-201ENST00000476452 299 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC117394.1-201ENST00000477323 567 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 RN7SL727P-201ENST00000482164 296 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC090543.2-201ENST00000483963 348 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC004057.1-201ENST00000485827 348 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC004980.4-201ENST00000513375 203 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 RN7SKP66-201ENST00000516681 231 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC079075.1-201ENST00000559543 878 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC087477.6-201ENST00000559595 843 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 MTND6P33-201ENST00000571794 183 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC011447.4-201ENST00000587562 111 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC008638.3-201ENST00000603341 463 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC009163.6-201ENST00000612367 342 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC078899.5-201ENST00000612475 178 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 EIF3FP1-201ENST00000613970 806 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 MIR6715B-201ENST00000637172 77 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 OR11H5P-202ENST00000641612 1325 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 AC008758.3-201ENST00000507003 1829 ntBASIC3.65□□□□□ -1.83
HIST1H1AQ02539 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HIST1H1AQ02539 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 CASC19-281ENST00000642118 1554 ntBASIC3.64□□□□□ -1.83
HIST1H1AQ02539 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.64□□□□□ -1.83
HIST1H1AQ02539 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 AC011155.1-201ENST00000316512 456 ntBASIC3.64□□□□□ -1.83
HIST1H1AQ02539 RNA5SP428-201ENST00000365129 132 ntBASIC3.64□□□□□ -1.83
HIST1H1AQ02539 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 RNU6-1263P-201ENST00000384601 106 ntBASIC3.64□□□□□ -1.83
HIST1H1AQ02539 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.64□□□□□ -1.83
HIST1H1AQ02539 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms