Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDKL1Q00532 RN7SKP104-201ENST00000362605 328 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 RNA5SP507-201ENST00000363603 121 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 SNORD65-201ENST00000391079 73 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 RNU2-22P-201ENST00000411266 212 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 RPL23AP27-201ENST00000415161 451 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 CHEK2P3-201ENST00000416118 248 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 CYCSP10-201ENST00000417973 294 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 AL590623.1-201ENST00000427864 105 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 RPS17P8-201ENST00000434525 335 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.71□□□□□ -1.66
CDKL1Q00532 OTX2P1-201ENST00000450956 354 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.71□□□□□ -1.66
CDKL1Q00532 EIF2S2P5-201ENST00000457635 968 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 GAPDHP56-201ENST00000506031 988 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 HMGB1P47-201ENST00000511281 589 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL1Q00532 RNU6-760P-201ENST00000516078 97 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 RNU6-491P-201ENST00000516099 110 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 BUD31P1-201ENST00000521828 359 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL1Q00532 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.71□□□□□ -1.66
CDKL1Q00532 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 RN7SL753P-201ENST00000581238 290 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 AC020910.3-201ENST00000603701 874 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 AC091979.2-201ENST00000607514 214 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 AC012467.1-201ENST00000607740 256 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 AC007497.1-201ENST00000610421 561 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDKL1Q00532 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDKL1Q00532 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 OR5AC4P-202ENST00000642086 985 ntBASIC4.71□□□□□ -1.66
CDKL1Q00532 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL1Q00532 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL1Q00532 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL1Q00532 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CDKL1Q00532 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDKL1Q00532 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL1Q00532 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL1Q00532 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.7□□□□□ -1.66
CDKL1Q00532 AC107068.1-201ENST00000563286 4218 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 AL121950.1-201ENST00000624993 2077 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 CASC19-204ENST00000641001 2055 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDKL1Q00532 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL1Q00532 RNU1-83P-201ENST00000363426 164 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 SNORA27.3-201ENST00000364937 134 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 Z68694.1-201ENST00000413929 841 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.7□□□□□ -1.66
CDKL1Q00532 NPM1P22-201ENST00000427761 952 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.7□□□□□ -1.66
CDKL1Q00532 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL1Q00532 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.7□□□□□ -1.66
CDKL1Q00532 Z99127.2-201ENST00000441426 334 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 BTBD7P2-201ENST00000441962 620 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 CEACAMP7-201ENST00000444105 496 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL1Q00532 TRY2P-201ENST00000448860 689 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 AC004815.1-201ENST00000484185 331 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL1Q00532 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.7□□□□□ -1.66
CDKL1Q00532 ACTR6P1-201ENST00000514311 1104 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.7□□□□□ -1.66
CDKL1Q00532 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.7□□□□□ -1.66
CDKL1Q00532 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.7□□□□□ -1.66
CDKL1Q00532 AC009032.1-201ENST00000617574 431 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 AL121890.2-201ENST00000617644 465 ntBASIC4.7□□□□□ -1.66
CDKL1Q00532 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.7□□□□□ -1.66
CDKL1Q00532 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL1Q00532 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL1Q00532 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms