Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.41□□□□□ -1.86
CKS1BP61024 AL133325.1-201ENST00000421090 382 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 HMGB3P5-201ENST00000428894 612 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.41□□□□□ -1.86
CKS1BP61024 PTMAP6-201ENST00000439110 327 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AL161636.2-201ENST00000445179 927 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CKS1BP61024 RN7SL170P-201ENST00000487098 295 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC138866.2-201ENST00000508650 584 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.41□□□□□ -1.86
CKS1BP61024 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.41□□□□□ -1.86
CKS1BP61024 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.41□□□□□ -1.86
CKS1BP61024 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CKS1BP61024 TOMM20P1-201ENST00000534518 427 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.41□□□□□ -1.86
CKS1BP61024 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.41□□□□□ -1.86
CKS1BP61024 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.41□□□□□ -1.86
CKS1BP61024 ABI1P1-201ENST00000603375 1120 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 AL049634.3-201ENST00000604968 457 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AC000068.2-201ENST00000608816 460 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AC108359.1-201ENST00000616451 1211 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AL356274.1-201ENST00000617064 410 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AC005086.4-201ENST00000623065 213 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AL691477.1-201ENST00000624398 162 ntBASIC3.41□□□□□ -1.86
CKS1BP61024 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CKS1BP61024 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CKS1BP61024 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.41□□□□□ -1.86
CKS1BP61024 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.41□□□□□ -1.86
CKS1BP61024 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CKS1BP61024 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CKS1BP61024 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.41□□□□□ -1.86
CKS1BP61024 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CKS1BP61024 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CKS1BP61024 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CKS1BP61024 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
CKS1BP61024 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.4□□□□□ -1.86
CKS1BP61024 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CKS1BP61024 MTND4P10-201ENST00000446199 1363 ntBASIC3.4□□□□□ -1.86
CKS1BP61024 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CKS1BP61024 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.4□□□□□ -1.86
CKS1BP61024 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CKS1BP61024 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.4□□□□□ -1.87
CKS1BP61024 MIR133B-201ENST00000362210 119 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CKS1BP61024 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.4□□□□□ -1.87
CKS1BP61024 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CKS1BP61024 MIR600-201ENST00000385007 98 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CKS1BP61024 BMS1P17-202ENST00000416720 316 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 AC093155.2-201ENST00000420734 937 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 MTND2P11-201ENST00000423638 648 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.4□□□□□ -1.87
CKS1BP61024 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.4□□□□□ -1.87
CKS1BP61024 AC073069.1-201ENST00000428657 441 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.4□□□□□ -1.87
CKS1BP61024 RPL7P33-201ENST00000444159 742 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.4□□□□□ -1.87
CKS1BP61024 HMGN2P7-201ENST00000456186 273 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 RN7SL649P-201ENST00000496974 275 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 AC139783.2-201ENST00000504847 1145 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.4□□□□□ -1.87
CKS1BP61024 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CKS1BP61024 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.4□□□□□ -1.87
CKS1BP61024 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.4□□□□□ -1.87
CKS1BP61024 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.4□□□□□ -1.87
CKS1BP61024 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC3.4□□□□□ -1.87
CKS1BP61024 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CKS1BP61024 AC068714.1-201ENST00000559623 800 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 AC021483.2-201ENST00000567415 758 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 AC010547.6-201ENST00000571789 193 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 RBM22P1-201ENST00000578589 1214 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.4□□□□□ -1.87
CKS1BP61024 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CKS1BP61024 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.4□□□□□ -1.87
CKS1BP61024 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC3.4□□□□□ -1.87
CKS1BP61024 AP000843.1-201ENST00000624880 701 ntBASIC3.4□□□□□ -1.87
CKS1BP61024 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CKS1BP61024 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CKS1BP61024 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
CKS1BP61024 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CKS1BP61024 AL359922.3-201ENST00000624779 1670 ntBASIC3.39□□□□□ -1.87
CKS1BP61024 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS1BP61024 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms