Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN20P56880 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN20P56880 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
CLDN20P56880 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN20P56880 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN20P56880 RNU1-43P-201ENST00000365052 165 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN20P56880 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN20P56880 AL034374.1-201ENST00000406329 351 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 RN7SKP278-201ENST00000410504 342 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 AC106883.1-201ENST00000418805 562 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 AC093655.2-201ENST00000425735 631 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 DEFB130D-201ENST00000426866 237 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 AL139148.1-201ENST00000427122 680 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN20P56880 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN20P56880 RPS7P2-201ENST00000435134 607 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 CYCSP24-201ENST00000445119 316 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLDN20P56880 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN20P56880 snoU109.3-201ENST00000459477 145 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN20P56880 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN20P56880 AC008427.1-201ENST00000503102 655 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 IGBP1P4-201ENST00000503202 879 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 PRELID3BP6-201ENST00000503839 571 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 HMGN1P9-201ENST00000515212 298 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN20P56880 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN20P56880 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN20P56880 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN20P56880 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN20P56880 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.78□□□□□ -1.64
CLDN20P56880 OR11J2P-201ENST00000555298 907 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN20P56880 AC010735.1-201ENST00000567305 1026 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 OR7E18P-201ENST00000592589 702 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN20P56880 AL121652.1-201ENST00000608851 448 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 AC126915.2-201ENST00000610957 190 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 AC024023.1-201ENST00000624530 922 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN20P56880 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN20P56880 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN20P56880 AC083865.1-201ENST00000636634 831 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN20P56880 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN20P56880 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN20P56880 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN20P56880 RLIMP2-201ENST00000427891 1563 ntBASIC4.78□□□□□ -1.64
CLDN20P56880 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN20P56880 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN20P56880 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN20P56880 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLDN20P56880 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 AC106754.1-201ENST00000562632 1513 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CLDN20P56880 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN20P56880 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLDN20P56880 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN20P56880 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN20P56880 HMGB1P13-201ENST00000406019 642 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AC096533.1-201ENST00000411645 353 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 DPPA2P3-201ENST00000411853 655 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 PCNPP4-201ENST00000414817 517 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.77□□□□□ -1.65
CLDN20P56880 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN20P56880 TCEA1P2-201ENST00000420496 906 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN20P56880 AC012519.1-201ENST00000424588 610 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN20P56880 AC004854.1-201ENST00000440356 349 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.77□□□□□ -1.65
CLDN20P56880 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN20P56880 RN7SL222P-201ENST00000476452 299 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 RPL7P40-201ENST00000481703 745 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 RN7SL727P-201ENST00000482164 296 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AC010374.1-201ENST00000503762 1237 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 RNU6-1004P-201ENST00000516584 111 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN20P56880 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN20P56880 AP003717.3-201ENST00000544832 1180 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN20P56880 AL049830.4-201ENST00000555149 351 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AL121594.4-201ENST00000556211 1196 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AL109741.3-201ENST00000561748 592 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AP000919.1-202ENST00000581139 1264 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AC005252.1-201ENST00000604518 1063 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AC018618.2-201ENST00000604770 446 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AP002802.2-201ENST00000605877 235 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 OR7A19P-201ENST00000608051 733 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AC015871.5-202ENST00000623252 701 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 AC010435.1-201ENST00000623353 1177 ntBASIC4.77□□□□□ -1.65
CLDN20P56880 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms