Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK1P53667 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK1P53667 AC006453.5-201ENST00000636451 619 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LIMK1P53667 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LIMK1P53667 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK1P53667 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LIMK1P53667 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 ADAM5-202ENST00000399789 1942 ntBASIC5.17□□□□□ -1.58
LIMK1P53667 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.17□□□□□ -1.58
LIMK1P53667 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIMK1P53667 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 SNORD115-48-201ENST00000364764 76 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 RNA5SP455-201ENST00000365190 119 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 AP002530.1-201ENST00000405705 684 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 UBE2V1P15-201ENST00000407776 448 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 RPL26P37-201ENST00000411983 438 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AL590806.1-201ENST00000415818 853 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LIMK1P53667 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 GTF2IP2-201ENST00000424290 697 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 RSL24D1P6-201ENST00000426934 401 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.16□□□□□ -1.58
LIMK1P53667 AL359265.2-201ENST00000434367 631 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 RPS6P2-201ENST00000454208 705 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
LIMK1P53667 AC020898.1-201ENST00000474167 787 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.16□□□□□ -1.58
LIMK1P53667 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK1P53667 PGBD4P4-201ENST00000509673 613 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 BTF3P13-201ENST00000513224 490 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 MTCYBP19-201ENST00000517463 1124 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK1P53667 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK1P53667 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK1P53667 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.16□□□□□ -1.58
LIMK1P53667 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK1P53667 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.16□□□□□ -1.58
LIMK1P53667 AC040958.1-201ENST00000561102 201 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 AC068020.1-201ENST00000594215 661 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AC068790.7-201ENST00000602347 528 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AC130352.1-201ENST00000602979 661 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AC092653.1-201ENST00000608509 531 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AL096803.3-201ENST00000609032 532 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.16□□□□□ -1.58
LIMK1P53667 AC091932.2-201ENST00000623014 291 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 AL356094.1-201ENST00000624663 1212 ntBASIC5.16□□□□□ -1.58
LIMK1P53667 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.16□□□□□ -1.58
LIMK1P53667 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.16□□□□□ -1.58
LIMK1P53667 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.16□□□□□ -1.58
LIMK1P53667 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LIMK1P53667 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIMK1P53667 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LIMK1P53667 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LIMK1P53667 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LIMK1P53667 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
LIMK1P53667 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.15□□□□□ -1.58
LIMK1P53667 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.15□□□□□ -1.58
LIMK1P53667 MAPK10-263ENST00000641052 4307 ntBASIC5.15□□□□□ -1.58
LIMK1P53667 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
LIMK1P53667 TCP1P3-201ENST00000414406 1498 ntBASIC5.15□□□□□ -1.58
LIMK1P53667 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.15□□□□□ -1.58
LIMK1P53667 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.15□□□□□ -1.58
LIMK1P53667 OR9G4-201ENST00000302957 984 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 Y_RNA.126-201ENST00000363382 111 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.15□□□□□ -1.59
LIMK1P53667 RNU6-146P-201ENST00000384602 108 ntBASIC5.15□□□□□ -1.59
LIMK1P53667 AL049693.1-201ENST00000402760 611 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms