Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.52□□□□□ -1.53
NUP98P52948 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NUP98P52948 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP98P52948 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP98P52948 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP98P52948 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP98P52948 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NUP98P52948 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP98P52948 CASKP1-201ENST00000412870 582 ntBASIC5.51□□□□□ -1.53
NUP98P52948 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP98P52948 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP98P52948 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP98P52948 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP98P52948 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP98P52948 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 AC010201.1-201ENST00000605051 540 ntBASIC5.51□□□□□ -1.53
NUP98P52948 AP002360.3-201ENST00000607673 710 ntBASIC5.51□□□□□ -1.53
NUP98P52948 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP98P52948 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP98P52948 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP98P52948 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP98P52948 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NUP98P52948 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP98P52948 AC099654.3-201ENST00000447087 1546 ntBASIC5.51□□□□□ -1.53
NUP98P52948 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP98P52948 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.51□□□□□ -1.53
NUP98P52948 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NUP98P52948 AC139769.1-204ENST00000472297 1931 ntBASIC5.51□□□□□ -1.53
NUP98P52948 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NUP98P52948 RN7SKP167-201ENST00000411047 285 ntBASIC5.51□□□□□ -1.53
NUP98P52948 CYCSP19-201ENST00000411715 316 ntBASIC5.51□□□□□ -1.53
NUP98P52948 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.51□□□□□ -1.53
NUP98P52948 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 MFSD13B-201ENST00000420133 1290 ntBASIC5.51□□□□□ -1.53
NUP98P52948 EIF4A1P1-201ENST00000420241 934 ntBASIC5.51□□□□□ -1.53
NUP98P52948 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP98P52948 RPL23AP38-201ENST00000423801 469 ntBASIC5.51□□□□□ -1.53
NUP98P52948 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP98P52948 RPL21P89-201ENST00000444021 467 ntBASIC5.51□□□□□ -1.53
NUP98P52948 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 DDX39BP2-208ENST00000453923 258 ntBASIC5.51□□□□□ -1.53
NUP98P52948 RNA5SP303-201ENST00000516192 130 ntBASIC5.51□□□□□ -1.53
NUP98P52948 RNA5SP49-201ENST00000516450 115 ntBASIC5.51□□□□□ -1.53
NUP98P52948 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP98P52948 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP98P52948 AC005520.3-201ENST00000602874 370 ntBASIC5.51□□□□□ -1.53
NUP98P52948 IMMP1LP1-201ENST00000605170 488 ntBASIC5.51□□□□□ -1.53
NUP98P52948 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP98P52948 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NUP98P52948 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP98P52948 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP98P52948 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP98P52948 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NUP98P52948 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NUP98P52948 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP98P52948 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP98P52948 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP98P52948 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP98P52948 MIR372-201ENST00000362225 67 ntBASIC5.5□□□□□ -1.53
NUP98P52948 RNA5SP283-201ENST00000365604 119 ntBASIC5.5□□□□□ -1.53
NUP98P52948 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
NUP98P52948 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP98P52948 PPIAP31-201ENST00000405422 495 ntBASIC5.5□□□□□ -1.53
NUP98P52948 AL445189.1-201ENST00000405722 338 ntBASIC5.5□□□□□ -1.53
NUP98P52948 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP98P52948 RPL6P29-201ENST00000414863 865 ntBASIC5.5□□□□□ -1.53
NUP98P52948 AL358176.3-201ENST00000420757 454 ntBASIC5.5□□□□□ -1.53
NUP98P52948 ARAFP1-201ENST00000422172 605 ntBASIC5.5□□□□□ -1.53
NUP98P52948 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP98P52948 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP98P52948 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP98P52948 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.5□□□□□ -1.53
NUP98P52948 AC090286.3-201ENST00000573133 187 ntBASIC5.5□□□□□ -1.53
NUP98P52948 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP98P52948 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP98P52948 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP98P52948 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP98P52948 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 AL603750.1-201ENST00000624216 1717 ntBASIC5.49□□□□□ -1.53
NUP98P52948 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP98P52948 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP98P52948 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
NUP98P52948 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP98P52948 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP98P52948 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NUP98P52948 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NUP98P52948 RNU1-132P-201ENST00000364300 164 ntBASIC5.49□□□□□ -1.53
NUP98P52948 AL035696.2-201ENST00000407941 709 ntBASIC5.49□□□□□ -1.53
NUP98P52948 RNA5SP36-201ENST00000410197 133 ntBASIC5.49□□□□□ -1.53
NUP98P52948 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms