Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 AC006484.1-201ENST00000435086 1884 ntBASIC5.7□□□□□ -1.5
NEK3P51956 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 CIR1P2-201ENST00000514821 1342 ntBASIC5.7□□□□□ -1.5
NEK3P51956 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.7□□□□□ -1.5
NEK3P51956 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NEK3P51956 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NEK3P51956 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
NEK3P51956 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NEK3P51956 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.69□□□□□ -1.5
NEK3P51956 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.69□□□□□ -1.5
NEK3P51956 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NEK3P51956 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NEK3P51956 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.69□□□□□ -1.5
NEK3P51956 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 AL512646.1-201ENST00000269395 1077 ntBASIC5.69□□□□□ -1.5
NEK3P51956 U3.28-201ENST00000391249 210 ntBASIC5.69□□□□□ -1.5
NEK3P51956 MTCO1P56-201ENST00000401674 224 ntBASIC5.69□□□□□ -1.5
NEK3P51956 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.69□□□□□ -1.5
NEK3P51956 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.69□□□□□ -1.5
NEK3P51956 RPS6P23-201ENST00000413224 722 ntBASIC5.69□□□□□ -1.5
NEK3P51956 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.69□□□□□ -1.5
NEK3P51956 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.69□□□□□ -1.5
NEK3P51956 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.69□□□□□ -1.5
NEK3P51956 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.69□□□□□ -1.5
NEK3P51956 NDUFB4P8-201ENST00000435351 367 ntBASIC5.69□□□□□ -1.5
NEK3P51956 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.69□□□□□ -1.5
NEK3P51956 EIF4A1P11-201ENST00000451239 222 ntBASIC5.69□□□□□ -1.5
NEK3P51956 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.69□□□□□ -1.5
NEK3P51956 RPL21P131-201ENST00000497298 483 ntBASIC5.69□□□□□ -1.5
NEK3P51956 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.69□□□□□ -1.5
NEK3P51956 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.69□□□□□ -1.5
NEK3P51956 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.69□□□□□ -1.5
NEK3P51956 SNORA19.3-201ENST00000516165 130 ntBASIC5.69□□□□□ -1.5
NEK3P51956 IGJP1-201ENST00000522682 475 ntBASIC5.69□□□□□ -1.5
NEK3P51956 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.69□□□□□ -1.5
NEK3P51956 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 HSPE1P2-201ENST00000554777 306 ntBASIC5.69□□□□□ -1.5
NEK3P51956 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.69□□□□□ -1.5
NEK3P51956 MRPS21P7-201ENST00000566937 238 ntBASIC5.69□□□□□ -1.5
NEK3P51956 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 MIR3176-201ENST00000582210 90 ntBASIC5.69□□□□□ -1.5
NEK3P51956 MIR4660-201ENST00000583549 74 ntBASIC5.69□□□□□ -1.5
NEK3P51956 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.69□□□□□ -1.5
NEK3P51956 AC068787.1-201ENST00000623908 691 ntBASIC5.69□□□□□ -1.5
NEK3P51956 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.69□□□□□ -1.5
NEK3P51956 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.69□□□□□ -1.5
NEK3P51956 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
NEK3P51956 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.69□□□□□ -1.5
NEK3P51956 LINC01963-201ENST00000562038 3148 ntBASIC5.69□□□□□ -1.5
NEK3P51956 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.69□□□□□ -1.5
NEK3P51956 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.69□□□□□ -1.5
NEK3P51956 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NEK3P51956 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NEK3P51956 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.68□□□□□ -1.5
NEK3P51956 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.68□□□□□ -1.5
NEK3P51956 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 AC104964.3-201ENST00000606115 2860 ntBASIC5.68□□□□□ -1.5
NEK3P51956 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 RN7SKP160-201ENST00000363804 340 ntBASIC5.68□□□□□ -1.5
NEK3P51956 AC005522.1-201ENST00000395416 346 ntBASIC5.68□□□□□ -1.5
NEK3P51956 AL391361.1-201ENST00000405580 489 ntBASIC5.68□□□□□ -1.5
NEK3P51956 OSTCP5-201ENST00000425293 453 ntBASIC5.68□□□□□ -1.5
NEK3P51956 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.68□□□□□ -1.5
NEK3P51956 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.68□□□□□ -1.5
NEK3P51956 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.68□□□□□ -1.5
NEK3P51956 UBE2V1P5-201ENST00000440070 405 ntBASIC5.68□□□□□ -1.5
NEK3P51956 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.68□□□□□ -1.5
NEK3P51956 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.68□□□□□ -1.5
NEK3P51956 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 EIF3LP3-201ENST00000495197 822 ntBASIC5.68□□□□□ -1.5
NEK3P51956 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 DUTP7-201ENST00000507982 486 ntBASIC5.68□□□□□ -1.5
NEK3P51956 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.68□□□□□ -1.5
NEK3P51956 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.68□□□□□ -1.5
NEK3P51956 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NEK3P51956 AC110760.3-202ENST00000515177 371 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms