Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL12P48061 AC022893.2-201ENST00000564832 3296 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 AC116158.1-201ENST00000560231 2129 ntBASIC4.66□□□□□ -1.66
CXCL12P48061 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL12P48061 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.66□□□□□ -1.66
CXCL12P48061 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
CXCL12P48061 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL12P48061 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.65□□□□□ -1.66
CXCL12P48061 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL12P48061 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL12P48061 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.65□□□□□ -1.66
CXCL12P48061 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL12P48061 AC125257.1-201ENST00000560400 2930 ntBASIC4.65□□□□□ -1.66
CXCL12P48061 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL12P48061 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.65□□□□□ -1.66
CXCL12P48061 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
CXCL12P48061 RPL23AP26-201ENST00000412728 464 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 TMSB10P2-201ENST00000416049 131 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 AC013429.2-201ENST00000418798 781 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.65□□□□□ -1.67
CXCL12P48061 AL389915.1-201ENST00000422463 466 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 FTH1P16-201ENST00000435241 552 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL12P48061 SCARNA10-201ENST00000459255 330 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 RN7SL98P-201ENST00000462271 300 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 AC090602.1-201ENST00000469695 252 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 AC025164.1-201ENST00000496249 478 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 SAP18P1-201ENST00000512058 390 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL12P48061 AP003730.1-201ENST00000524605 285 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL12P48061 NPM1P5-201ENST00000557228 838 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.65□□□□□ -1.67
CXCL12P48061 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.65□□□□□ -1.67
CXCL12P48061 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL12P48061 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL12P48061 AC002069.2-201ENST00000603580 883 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 AC245389.1-201ENST00000605141 529 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL12P48061 AC090948.2-201ENST00000607363 564 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL12P48061 MIR3653-201ENST00000625572 110 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL12P48061 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.65□□□□□ -1.67
CXCL12P48061 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL12P48061 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.65□□□□□ -1.67
CXCL12P48061 AC017104.4-201ENST00000636283 1592 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 AP005435.3-201ENST00000531260 3198 ntBASIC4.65□□□□□ -1.67
CXCL12P48061 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL12P48061 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL12P48061 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL12P48061 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL12P48061 RN7SKP224-201ENST00000364140 325 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 RNA5SP366-201ENST00000365454 123 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL12P48061 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.64□□□□□ -1.67
CXCL12P48061 GPS2P1-201ENST00000411761 986 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 CEACAMP8-201ENST00000413902 580 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.64□□□□□ -1.67
CXCL12P48061 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.64□□□□□ -1.67
CXCL12P48061 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.64□□□□□ -1.67
CXCL12P48061 OR4C10P-201ENST00000434991 931 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 RPL12P18-201ENST00000437175 325 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL12P48061 PHBP16-201ENST00000446318 950 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.64□□□□□ -1.67
CXCL12P48061 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL12P48061 RPS7P7-201ENST00000463499 571 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.64□□□□□ -1.67
CXCL12P48061 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL12P48061 KATNBL1P4-201ENST00000503545 918 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 SUMO2P4-201ENST00000504193 276 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL12P48061 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL12P48061 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.64□□□□□ -1.67
CXCL12P48061 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.64□□□□□ -1.67
CXCL12P48061 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.64□□□□□ -1.67
CXCL12P48061 LINC01808-202ENST00000641680 1116 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.64□□□□□ -1.67
CXCL12P48061 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.64□□□□□ -1.67
CXCL12P48061 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXCL12P48061 SOCS5P3-201ENST00000425115 1576 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 AC011447.7-201ENST00000624228 1590 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CXCL12P48061 AC005261.4-201ENST00000600047 1385 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 AC093849.1-201ENST00000563631 2209 ntBASIC4.64□□□□□ -1.67
CXCL12P48061 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.64□□□□□ -1.67
CXCL12P48061 AC009643.2-201ENST00000603543 1448 ntBASIC4.63□□□□□ -1.67
CXCL12P48061 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL12P48061 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL12P48061 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.63□□□□□ -1.67
CXCL12P48061 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.63□□□□□ -1.67
CXCL12P48061 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXCL12P48061 RNA5SP453-201ENST00000362503 119 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms