Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 POU6F2-201ENST00000403058 2335 ntTSL 5 BASIC9.39□□□□□ -0.91
HOXD11P31277 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 TARDBP-230ENST00000639083 2269 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
HOXD11P31277 FTO-222ENST00000637969 2889 ntTSL 5 BASIC9.39□□□□□ -0.91
HOXD11P31277 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC9.39□□□□□ -0.91
HOXD11P31277 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC9.39□□□□□ -0.91
HOXD11P31277 GNL2P1-201ENST00000451274 2190 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 ACTN4P2-201ENST00000473049 1892 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 AC091304.1-201ENST00000564897 3034 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC9.39□□□□□ -0.91
HOXD11P31277 CHRNA6-201ENST00000276410 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 RNA5SP361-201ENST00000362686 118 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
HOXD11P31277 UBA52P6-201ENST00000399822 382 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 RPSAP8-201ENST00000429844 889 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC9.39□□□□□ -0.91
HOXD11P31277 OR5S1P-201ENST00000453063 951 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 AC005042.3-201ENST00000453230 174 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 RN7SL184P-201ENST00000488308 297 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC9.39□□□□□ -0.91
HOXD11P31277 AK3P2-201ENST00000507976 429 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 IGLVV-58-201ENST00000520445 304 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 CD3D-204ENST00000529594 422 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC9.39□□□□□ -0.91
HOXD11P31277 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 AC137800.1-202ENST00000562098 446 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 RN7SL802P-201ENST00000577858 299 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 AC002545.1-201ENST00000592511 181 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 AC005176.2-201ENST00000596933 147 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC9.39□□□□□ -0.91
HOXD11P31277 RMST_4.1-201ENST00000616886 107 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 ZRANB2-AS2-224ENST00000626344 400 ntTSL 5 BASIC9.39□□□□□ -0.91
HOXD11P31277 MIR6844-201ENST00000637122 62 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC9.39□□□□□ -0.91
HOXD11P31277 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 CX3CR1-205ENST00000541347 3255 ntAPPRIS P1 TSL 4 BASIC9.39□□□□□ -0.91
HOXD11P31277 MYO1H-202ENST00000431443 4258 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
HOXD11P31277 AC026877.1-201ENST00000476047 1411 ntBASIC9.39□□□□□ -0.91
HOXD11P31277 ZBTB3-201ENST00000394807 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 PCDHGC5-201ENST00000252087 4761 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 HTR3C-201ENST00000318351 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC9.39□□□□□ -0.91
HOXD11P31277 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC9.39□□□□□ -0.91
HOXD11P31277 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
HOXD11P31277 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 TMX3-201ENST00000299608 4927 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
HOXD11P31277 MAPK10-338ENST00000641647 3362 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
HOXD11P31277 ENTPD7-201ENST00000370489 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 AL158212.3-201ENST00000564352 4237 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 BIRC2-201ENST00000227758 3743 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 OXNAD1-207ENST00000606098 2288 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 DAB2-202ENST00000339788 3690 ntTSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 GOLGA8N-201ENST00000448387 5329 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 MIR654-201ENST00000385199 81 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 MIR185-201ENST00000385288 82 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 AC127537.1-201ENST00000418183 748 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 RPSAP59-201ENST00000421048 890 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 HIST1H2APS5-201ENST00000454320 369 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 SLC25A15P2-201ENST00000457292 338 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 GNGT2-203ENST00000507680 585 ntAPPRIS P1 TSL 4 BASIC9.38□□□□□ -0.91
HOXD11P31277 RN7SKP49-201ENST00000516675 260 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 SMILR-201ENST00000533992 553 ntTSL 4 BASIC9.38□□□□□ -0.91
HOXD11P31277 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC9.38□□□□□ -0.91
HOXD11P31277 DPPA5P2-201ENST00000561451 299 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 MIR3646-201ENST00000578301 84 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 AC069294.1-201ENST00000608397 350 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 uc_338.28-201ENST00000612082 187 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 AC015819.1-201ENST00000613588 663 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 AL591926.7-201ENST00000614301 211 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC9.38□□□□□ -0.91
HOXD11P31277 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 TTC17-201ENST00000039989 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 RFPL4B-201ENST00000441065 1900 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
HOXD11P31277 KCNJ15-208ENST00000398938 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms