Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 C4BPAP2-201ENST00000428434 478 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC8P31273 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC8P31273 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC8P31273 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC8P31273 PRPF38AP1-201ENST00000451976 933 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 CALM1P2-201ENST00000452941 448 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 snoU13.1-201ENST00000459157 104 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 RN7SL517P-201ENST00000462240 305 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 NDUFA5P9-201ENST00000472609 340 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC8P31273 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC8P31273 MTCYBP19-201ENST00000517463 1124 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXC8P31273 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXC8P31273 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC8P31273 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC8P31273 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC8P31273 MIR5699-201ENST00000578903 90 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 MIR4284-201ENST00000578924 81 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 AC092474.3-201ENST00000603022 568 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 AL356274.1-201ENST00000617064 410 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 AL162233.1-201ENST00000620014 944 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 AC019206.1-201ENST00000621938 425 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 AL356094.1-201ENST00000624663 1212 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC8P31273 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC8P31273 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
HOXC8P31273 KARSP3-201ENST00000571212 1504 ntBASIC5.36□□□□□ -1.55
HOXC8P31273 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC8P31273 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC8P31273 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC8P31273 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC8P31273 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC8P31273 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC8P31273 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC8P31273 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC8P31273 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HOXC8P31273 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXC8P31273 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC8P31273 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC8P31273 MIR129-1-201ENST00000384972 72 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AL034374.1-201ENST00000406329 351 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 RN7SKP106-201ENST00000410832 272 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 ELOCP19-201ENST00000411919 318 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC8P31273 LINC00993-201ENST00000420453 540 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 Z99127.2-201ENST00000441426 334 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC8P31273 RN7SL385P-201ENST00000468873 276 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC8P31273 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
HOXC8P31273 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXC8P31273 AK3P4-201ENST00000504283 583 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC8P31273 ENPP7P11-201ENST00000505915 627 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 PRELID3BP5-201ENST00000508612 460 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AC021146.7-201ENST00000509604 775 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AC034244.2-201ENST00000514668 858 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 RNU6-889P-201ENST00000517189 103 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 RN7SKP92-201ENST00000517266 244 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC8P31273 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC8P31273 AL049839.1-201ENST00000556151 657 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC8P31273 MIR4715-201ENST00000584117 79 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 RPL26P30-202ENST00000602923 645 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AC073091.2-201ENST00000603205 907 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AL121932.1-201ENST00000605542 214 ntBASIC5.35□□□□□ -1.55
HOXC8P31273 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC8P31273 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC8P31273 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC8P31273 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC8P31273 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC8P31273 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HOXC8P31273 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC8P31273 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 AC007382.1-201ENST00000624376 2618 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC8P31273 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
HOXC8P31273 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC8P31273 RNA5SP397-201ENST00000391323 118 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 OR51B3P-201ENST00000412287 913 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 COX5BP7-201ENST00000414780 274 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 AL590806.1-201ENST00000415818 853 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 COX6CP17-201ENST00000421389 185 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 RPS27AP6-201ENST00000427962 448 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC8P31273 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC8P31273 AL353898.1-201ENST00000444055 238 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC8P31273 AC022431.1-201ENST00000450941 438 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXC8P31273 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXC8P31273 HPRT1P1-201ENST00000509498 657 ntBASIC5.34□□□□□ -1.55
HOXC8P31273 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC8P31273 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms