Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.43□□□□□ -1.54
CD40P25942 AC115283.1-201ENST00000427353 400 ntBASIC5.43□□□□□ -1.54
CD40P25942 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 AC005033.1-201ENST00000428904 813 ntBASIC5.43□□□□□ -1.54
CD40P25942 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 AC010881.1-201ENST00000433830 235 ntBASIC5.43□□□□□ -1.54
CD40P25942 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 UBE2V1P3-201ENST00000439651 417 ntBASIC5.43□□□□□ -1.54
CD40P25942 MTND2P20-201ENST00000440805 661 ntBASIC5.43□□□□□ -1.54
CD40P25942 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 FHP1-201ENST00000442741 703 ntBASIC5.43□□□□□ -1.54
CD40P25942 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 MTCYBP1-201ENST00000454315 1119 ntBASIC5.43□□□□□ -1.54
CD40P25942 VPS25P1-201ENST00000455691 508 ntBASIC5.43□□□□□ -1.54
CD40P25942 SUMO2P2-201ENST00000456482 255 ntBASIC5.43□□□□□ -1.54
CD40P25942 SNX18P26-201ENST00000458433 740 ntBASIC5.43□□□□□ -1.54
CD40P25942 AL603882.1-201ENST00000463059 681 ntBASIC5.43□□□□□ -1.54
CD40P25942 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 RPL5P12-201ENST00000477071 851 ntBASIC5.43□□□□□ -1.54
CD40P25942 AC013828.1-201ENST00000481845 158 ntBASIC5.43□□□□□ -1.54
CD40P25942 AC011825.1-201ENST00000484967 388 ntBASIC5.43□□□□□ -1.54
CD40P25942 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 MTND6P8-201ENST00000503471 522 ntBASIC5.43□□□□□ -1.54
CD40P25942 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CD40P25942 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 PCMTD1P2-201ENST00000565017 355 ntBASIC5.43□□□□□ -1.54
CD40P25942 MTND1P15-201ENST00000579262 949 ntBASIC5.43□□□□□ -1.54
CD40P25942 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.43□□□□□ -1.54
CD40P25942 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 DYNLL1P1-201ENST00000595442 269 ntBASIC5.43□□□□□ -1.54
CD40P25942 AP001823.1-201ENST00000604056 1003 ntBASIC5.43□□□□□ -1.54
CD40P25942 AL355816.1-201ENST00000607951 118 ntBASIC5.43□□□□□ -1.54
CD40P25942 AC107214.2-201ENST00000608204 634 ntBASIC5.43□□□□□ -1.54
CD40P25942 AP001437.1-201ENST00000608783 456 ntBASIC5.43□□□□□ -1.54
CD40P25942 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.43□□□□□ -1.54
CD40P25942 AC012414.7-202ENST00000622705 1090 ntBASIC5.43□□□□□ -1.54
CD40P25942 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 AP000550.3-201ENST00000637734 379 ntBASIC5.43□□□□□ -1.54
CD40P25942 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 CYP2G2P-201ENST00000594920 1485 ntBASIC5.43□□□□□ -1.54
CD40P25942 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
CD40P25942 MTCO1P23-201ENST00000415223 1526 ntBASIC5.43□□□□□ -1.54
CD40P25942 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.43□□□□□ -1.54
CD40P25942 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CD40P25942 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CD40P25942 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD40P25942 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CD40P25942 AL079343.1-201ENST00000572358 1771 ntBASIC5.42□□□□□ -1.54
CD40P25942 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CD40P25942 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CD40P25942 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD40P25942 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD40P25942 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CD40P25942 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.42□□□□□ -1.54
CD40P25942 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.42□□□□□ -1.54
CD40P25942 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.42□□□□□ -1.54
CD40P25942 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD40P25942 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.42□□□□□ -1.54
CD40P25942 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD40P25942 COX6B1P3-201ENST00000312310 260 ntBASIC5.42□□□□□ -1.54
CD40P25942 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.42□□□□□ -1.54
CD40P25942 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CD40P25942 RNU6-517P-201ENST00000384362 110 ntBASIC5.42□□□□□ -1.54
CD40P25942 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.42□□□□□ -1.54
CD40P25942 GAPDHP42-201ENST00000406848 981 ntBASIC5.42□□□□□ -1.54
CD40P25942 MIR1282-201ENST00000408865 101 ntBASIC5.42□□□□□ -1.54
CD40P25942 RN7SKP240-201ENST00000410583 375 ntBASIC5.42□□□□□ -1.54
CD40P25942 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.42□□□□□ -1.54
CD40P25942 PRELID3BP11-201ENST00000414230 479 ntBASIC5.42□□□□□ -1.54
CD40P25942 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.42□□□□□ -1.54
CD40P25942 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.42□□□□□ -1.54
CD40P25942 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.42□□□□□ -1.54
CD40P25942 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.42□□□□□ -1.54
CD40P25942 BMS1P19-201ENST00000433925 393 ntBASIC5.42□□□□□ -1.54
CD40P25942 PNKDP1-201ENST00000435914 430 ntBASIC5.42□□□□□ -1.54
CD40P25942 AC110602.1-201ENST00000437414 318 ntBASIC5.42□□□□□ -1.54
CD40P25942 PPIAP10-201ENST00000438675 458 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms