Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.32□□□□□ -1.24
RFX1P22670 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RFX1P22670 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RFX1P22670 SNORA70.3-201ENST00000365075 132 ntBASIC7.32□□□□□ -1.24
RFX1P22670 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RFX1P22670 RNU1-149P-201ENST00000390870 161 ntBASIC7.32□□□□□ -1.24
RFX1P22670 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 AL121878.1-201ENST00000418638 859 ntBASIC7.32□□□□□ -1.24
RFX1P22670 AL109913.1-201ENST00000421173 514 ntBASIC7.32□□□□□ -1.24
RFX1P22670 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.32□□□□□ -1.24
RFX1P22670 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.32□□□□□ -1.24
RFX1P22670 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 Z99127.3-201ENST00000448158 395 ntBASIC7.32□□□□□ -1.24
RFX1P22670 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 AL672167.3-201ENST00000465951 960 ntBASIC7.32□□□□□ -1.24
RFX1P22670 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 AF131216.2-201ENST00000512316 564 ntBASIC7.32□□□□□ -1.24
RFX1P22670 AC108064.1-201ENST00000513791 460 ntBASIC7.32□□□□□ -1.24
RFX1P22670 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 AC090502.2-201ENST00000549267 280 ntBASIC7.32□□□□□ -1.24
RFX1P22670 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 MIR3157-201ENST00000578688 85 ntBASIC7.32□□□□□ -1.24
RFX1P22670 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX1P22670 RPL7AP69-201ENST00000595306 806 ntBASIC7.32□□□□□ -1.24
RFX1P22670 BNIP3P33-201ENST00000598912 569 ntBASIC7.32□□□□□ -1.24
RFX1P22670 AC009027.1-201ENST00000604510 479 ntBASIC7.32□□□□□ -1.24
RFX1P22670 AL513218.1-201ENST00000606527 391 ntBASIC7.32□□□□□ -1.24
RFX1P22670 AL591926.1-201ENST00000620542 217 ntBASIC7.32□□□□□ -1.24
RFX1P22670 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 MIR3688-2-201ENST00000636963 87 ntBASIC7.32□□□□□ -1.24
RFX1P22670 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.32□□□□□ -1.24
RFX1P22670 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RFX1P22670 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
RFX1P22670 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RFX1P22670 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.32□□□□□ -1.24
RFX1P22670 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RFX1P22670 PROS2P-201ENST00000474651 1951 ntBASIC7.31□□□□□ -1.24
RFX1P22670 PWAR1-201ENST00000624188 2414 ntBASIC7.31□□□□□ -1.24
RFX1P22670 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RFX1P22670 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
RFX1P22670 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
RFX1P22670 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.31□□□□□ -1.24
RFX1P22670 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RFX1P22670 OR2M1P-201ENST00000318104 951 ntBASIC7.31□□□□□ -1.24
RFX1P22670 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 RNA5SP382-201ENST00000363355 112 ntBASIC7.31□□□□□ -1.24
RFX1P22670 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 YWHAZP6-201ENST00000399764 738 ntBASIC7.31□□□□□ -1.24
RFX1P22670 FGF7P8-201ENST00000402994 292 ntBASIC7.31□□□□□ -1.24
RFX1P22670 CYCSP17-201ENST00000407870 315 ntBASIC7.31□□□□□ -1.24
RFX1P22670 RNA5SP115-201ENST00000411160 107 ntBASIC7.31□□□□□ -1.24
RFX1P22670 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 BX890604.2-201ENST00000427883 474 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AC079807.1-201ENST00000429993 481 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.31□□□□□ -1.24
RFX1P22670 AL389925.1-201ENST00000432257 728 ntBASIC7.31□□□□□ -1.24
RFX1P22670 CLUHP1-201ENST00000435012 1190 ntBASIC7.31□□□□□ -1.24
RFX1P22670 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 PGBD4P3-201ENST00000440731 581 ntBASIC7.31□□□□□ -1.24
RFX1P22670 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC7.31□□□□□ -1.24
RFX1P22670 AL662791.1-201ENST00000441992 928 ntBASIC7.31□□□□□ -1.24
RFX1P22670 UBE2V1P7-201ENST00000446395 340 ntBASIC7.31□□□□□ -1.24
RFX1P22670 RPL39P6-201ENST00000448289 150 ntBASIC7.31□□□□□ -1.24
RFX1P22670 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX1P22670 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms