Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL139286.2-201ENST00000606838 396 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 AC012254.5-201ENST00000623573 478 ntBASIC7.11□□□□□ -1.27
LMNB1P20700 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LMNB1P20700 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.11□□□□□ -1.27
LMNB1P20700 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LMNB1P20700 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
LMNB1P20700 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
LMNB1P20700 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.1□□□□□ -1.27
LMNB1P20700 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
LMNB1P20700 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
LMNB1P20700 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.1□□□□□ -1.27
LMNB1P20700 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.1□□□□□ -1.27
LMNB1P20700 OR56B2P-201ENST00000317102 954 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 AC005294.1-201ENST00000355509 281 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 Y_RNA.560-201ENST00000384689 102 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 AL121977.1-201ENST00000401636 979 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.1□□□□□ -1.27
LMNB1P20700 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.1□□□□□ -1.27
LMNB1P20700 SRSF1P1-201ENST00000424058 520 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.1□□□□□ -1.27
LMNB1P20700 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.1□□□□□ -1.27
LMNB1P20700 C8orf59P1-201ENST00000429930 303 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC7.1□□□□□ -1.27
LMNB1P20700 CCDC75P1-201ENST00000469247 791 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.1□□□□□ -1.27
LMNB1P20700 AC104971.1-201ENST00000495117 578 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.1□□□□□ -1.27
LMNB1P20700 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.1□□□□□ -1.27
LMNB1P20700 NPM1P21-201ENST00000513394 762 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 RNA5SP116-201ENST00000516132 98 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 AC021678.3-201ENST00000517893 476 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.1□□□□□ -1.27
LMNB1P20700 NDUFA5P2-201ENST00000519723 344 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.1□□□□□ -1.27
LMNB1P20700 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.1□□□□□ -1.27
LMNB1P20700 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.1□□□□□ -1.27
LMNB1P20700 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.1□□□□□ -1.27
LMNB1P20700 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.1□□□□□ -1.27
LMNB1P20700 AP003465.2-201ENST00000602571 373 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 AL355073.2-201ENST00000612106 557 ntBASIC7.1□□□□□ -1.27
LMNB1P20700 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.1□□□□□ -1.27
LMNB1P20700 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LMNB1P20700 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.1□□□□□ -1.27
LMNB1P20700 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.1□□□□□ -1.27
LMNB1P20700 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LMNB1P20700 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.09□□□□□ -1.27
LMNB1P20700 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LMNB1P20700 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LMNB1P20700 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LMNB1P20700 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.09□□□□□ -1.27
LMNB1P20700 LINC01963-201ENST00000562038 3148 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 GTF2IP4-201ENST00000453092 2054 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LMNB1P20700 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LMNB1P20700 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC7.09□□□□□ -1.27
LMNB1P20700 AL672167.2-201ENST00000377164 879 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 RNU6-517P-201ENST00000384362 110 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 RNU6-549P-201ENST00000384433 107 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 MIR141-201ENST00000384975 95 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 AL109941.1-201ENST00000401925 229 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.09□□□□□ -1.27
LMNB1P20700 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.09□□□□□ -1.27
LMNB1P20700 VDAC1P6-201ENST00000430062 855 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC7.09□□□□□ -1.27
LMNB1P20700 CYCSP6-201ENST00000434498 302 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC7.09□□□□□ -1.27
LMNB1P20700 RPS24P1-201ENST00000438550 371 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.09□□□□□ -1.27
LMNB1P20700 MTND6P5-201ENST00000448266 512 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.09□□□□□ -1.27
LMNB1P20700 AL450023.1-201ENST00000450868 751 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 AC009220.1-201ENST00000451614 275 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 AL035407.2-201ENST00000454090 378 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 RPS29P22-201ENST00000472363 168 ntBASIC7.09□□□□□ -1.27
LMNB1P20700 RPL7P6-201ENST00000480903 738 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms