Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL133351.3-201ENST00000454998 193 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AL603882.1-201ENST00000463059 681 ntBASIC6.97□□□□□ -1.29
LIG1P18858 RN7SL326P-201ENST00000477493 296 ntBASIC6.97□□□□□ -1.29
LIG1P18858 RPL12P31-201ENST00000478433 450 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.97□□□□□ -1.29
LIG1P18858 Y_RNA.710-201ENST00000516975 110 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC011853.1-201ENST00000518911 454 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 OR4R3P-201ENST00000525084 838 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.97□□□□□ -1.29
LIG1P18858 ADI1P3-201ENST00000549509 470 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.97□□□□□ -1.29
LIG1P18858 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.97□□□□□ -1.29
LIG1P18858 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC6.97□□□□□ -1.29
LIG1P18858 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.97□□□□□ -1.29
LIG1P18858 AC091805.2-201ENST00000603848 235 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AL592221.1-201ENST00000605266 382 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC091946.2-201ENST00000606105 291 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC091965.4-201ENST00000607691 587 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AL391497.1-201ENST00000608671 547 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC025594.3-201ENST00000613068 790 ntBASIC6.97□□□□□ -1.29
LIG1P18858 RN7SL261P-201ENST00000613441 282 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AL607023.1-201ENST00000620045 248 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC074140.1-201ENST00000621617 208 ntBASIC6.97□□□□□ -1.29
LIG1P18858 SEPT14P19-203ENST00000633205 211 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LIG1P18858 AC099654.12-201ENST00000639868 649 ntBASIC6.97□□□□□ -1.29
LIG1P18858 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LIG1P18858 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.97□□□□□ -1.29
LIG1P18858 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
LIG1P18858 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIG1P18858 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
LIG1P18858 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
LIG1P18858 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
LIG1P18858 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.96□□□□□ -1.29
LIG1P18858 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LIG1P18858 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LIG1P18858 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.96□□□□□ -1.29
LIG1P18858 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.96□□□□□ -1.3
LIG1P18858 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
LIG1P18858 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
LIG1P18858 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
LIG1P18858 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 RN7SKP187-201ENST00000365536 330 ntBASIC6.96□□□□□ -1.3
LIG1P18858 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
LIG1P18858 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
LIG1P18858 GCNT1P4-201ENST00000404096 329 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC002524.1-201ENST00000411687 547 ntBASIC6.96□□□□□ -1.3
LIG1P18858 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 FNDC3CP-201ENST00000420795 1155 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.96□□□□□ -1.3
LIG1P18858 AC010975.2-201ENST00000427781 588 ntBASIC6.96□□□□□ -1.3
LIG1P18858 ATP5F1P1-201ENST00000433775 569 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.96□□□□□ -1.3
LIG1P18858 AC122718.1-201ENST00000439448 744 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.96□□□□□ -1.3
LIG1P18858 RPL23AP76-201ENST00000441860 458 ntBASIC6.96□□□□□ -1.3
LIG1P18858 POU5F1P5-201ENST00000445059 658 ntBASIC6.96□□□□□ -1.3
LIG1P18858 ST13P20-201ENST00000447996 1065 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AL162739.1-201ENST00000450606 307 ntBASIC6.96□□□□□ -1.3
LIG1P18858 KATNBL1P6-201ENST00000453433 915 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.96□□□□□ -1.3
LIG1P18858 FAM133DP-201ENST00000464802 691 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC116337.2-201ENST00000477662 156 ntBASIC6.96□□□□□ -1.3
LIG1P18858 RPL37P23-201ENST00000492641 294 ntBASIC6.96□□□□□ -1.3
LIG1P18858 RN7SL362P-201ENST00000494228 267 ntBASIC6.96□□□□□ -1.3
LIG1P18858 BNIP3P41-201ENST00000503774 571 ntBASIC6.96□□□□□ -1.3
LIG1P18858 MYL12BP2-201ENST00000503948 512 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC147055.4-201ENST00000504399 745 ntBASIC6.96□□□□□ -1.3
LIG1P18858 WBP1LP4-201ENST00000505043 344 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 OR4D12P-201ENST00000509361 911 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC018797.1-201ENST00000510791 255 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC008837.2-201ENST00000513076 418 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.96□□□□□ -1.3
LIG1P18858 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC6.96□□□□□ -1.3
LIG1P18858 AC109635.3-201ENST00000529536 185 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC118273.2-201ENST00000532092 465 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AL049779.3-201ENST00000557141 606 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.96□□□□□ -1.3
LIG1P18858 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 AC092325.1-201ENST00000566449 554 ntBASIC6.96□□□□□ -1.3
LIG1P18858 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.96□□□□□ -1.3
LIG1P18858 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.96□□□□□ -1.3
LIG1P18858 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.96□□□□□ -1.3
LIG1P18858 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.96□□□□□ -1.3
LIG1P18858 AC011374.2-201ENST00000607135 526 ntBASIC6.96□□□□□ -1.3
LIG1P18858 AC093388.1-201ENST00000609166 430 ntBASIC6.96□□□□□ -1.3
LIG1P18858 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms