Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOBP13765 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 LSM1P2-201ENST00000604911 322 ntBASIC4.62□□□□□ -1.67
HLA-DOBP13765 AC093424.1-201ENST00000604999 338 ntBASIC4.62□□□□□ -1.67
HLA-DOBP13765 AC090527.3-201ENST00000619041 548 ntBASIC4.62□□□□□ -1.67
HLA-DOBP13765 AC008115.4-201ENST00000619780 775 ntBASIC4.62□□□□□ -1.67
HLA-DOBP13765 AP002505.2-201ENST00000623585 696 ntBASIC4.62□□□□□ -1.67
HLA-DOBP13765 AC006963.1-201ENST00000624003 1052 ntBASIC4.62□□□□□ -1.67
HLA-DOBP13765 OR52B5P-202ENST00000641118 1110 ntBASIC4.62□□□□□ -1.67
HLA-DOBP13765 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-DOBP13765 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-DOBP13765 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.62□□□□□ -1.67
HLA-DOBP13765 SMG1P4-204ENST00000523028 4131 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC092376.2-201ENST00000622621 4116 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOBP13765 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOBP13765 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOBP13765 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC063976.2-201ENST00000425667 3556 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOBP13765 RPL21P67-201ENST00000402896 478 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AL390316.1-201ENST00000406279 553 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 DUTP5-201ENST00000406790 469 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 MIR1182-201ENST00000408363 97 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 RN7SKP16-201ENST00000410180 299 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AL592310.1-201ENST00000414330 671 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 PCNPP4-201ENST00000414817 517 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 SLC35E1P1-201ENST00000419313 864 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 NANOGP5-201ENST00000424456 877 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC000041.1-201ENST00000439655 175 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC245028.2-201ENST00000458673 253 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC009127.1-201ENST00000467090 155 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 RPL7P39-201ENST00000481157 744 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AL049874.2-201ENST00000492636 288 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 SNORA70.11-201ENST00000515987 138 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 SNORA70.13-201ENST00000516116 138 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOBP13765 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 OR11J2P-201ENST00000555298 907 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC009852.2-201ENST00000567898 485 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 MIR4489-201ENST00000578869 62 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 VN1R87P-201ENST00000596706 487 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 Z82195.1-201ENST00000604558 398 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC073387.2-201ENST00000604797 784 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AL450336.1-201ENST00000605180 586 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC012557.1-201ENST00000607115 611 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 RNU4-5P-201ENST00000607255 135 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AP005432.2-201ENST00000608162 586 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 MIR6768-201ENST00000610734 72 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 MIR6862-1-201ENST00000613016 70 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 MIR6862-2-201ENST00000614755 70 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC009464.1-201ENST00000615731 469 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC108359.1-201ENST00000616451 1211 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC135068.12-201ENST00000637370 931 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOBP13765 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AC107021.2-201ENST00000567714 2095 ntBASIC4.61□□□□□ -1.67
HLA-DOBP13765 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOBP13765 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOBP13765 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
HLA-DOBP13765 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOBP13765 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms