Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOP2AP11388 AC027228.2-201ENST00000567141 2154 ntBASIC7.74□□□□□ -1.17
TOP2AP11388 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
TOP2AP11388 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TOP2AP11388 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.73□□□□□ -1.17
TOP2AP11388 AL117339.2-201ENST00000430475 180 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 UBE2V1P3-201ENST00000439651 417 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.73□□□□□ -1.17
TOP2AP11388 AL157385.1-201ENST00000446973 268 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC7.73□□□□□ -1.17
TOP2AP11388 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.73□□□□□ -1.17
TOP2AP11388 RNU1-45P-201ENST00000517191 141 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.73□□□□□ -1.17
TOP2AP11388 MIR4286-201ENST00000580651 93 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 AP002360.3-201ENST00000607673 710 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
TOP2AP11388 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TOP2AP11388 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TOP2AP11388 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TOP2AP11388 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
TOP2AP11388 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC7.73□□□□□ -1.17
TOP2AP11388 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TOP2AP11388 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
TOP2AP11388 AL355852.1-201ENST00000454081 1771 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
TOP2AP11388 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
TOP2AP11388 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
TOP2AP11388 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
TOP2AP11388 RPEP2-201ENST00000432149 701 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 FTH1P21-201ENST00000512179 511 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 SNORA67.7-201ENST00000516664 135 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 AC105233.3-201ENST00000531125 744 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC7.73□□□□□ -1.17
TOP2AP11388 MIR3158-1-201ENST00000583596 81 ntBASIC7.73□□□□□ -1.17
TOP2AP11388 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
TOP2AP11388 AL133243.3-201ENST00000617415 3004 ntBASIC7.72□□□□□ -1.17
TOP2AP11388 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TOP2AP11388 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC7.72□□□□□ -1.17
TOP2AP11388 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOP2AP11388 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOP2AP11388 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC7.72□□□□□ -1.17
TOP2AP11388 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
TOP2AP11388 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
TOP2AP11388 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.72□□□□□ -1.17
TOP2AP11388 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOP2AP11388 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TOP2AP11388 RNA5SP130-201ENST00000364431 114 ntBASIC7.72□□□□□ -1.17
TOP2AP11388 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC7.72□□□□□ -1.17
TOP2AP11388 MRPL50P1-201ENST00000431951 384 ntBASIC7.72□□□□□ -1.17
TOP2AP11388 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.72□□□□□ -1.17
TOP2AP11388 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC7.72□□□□□ -1.17
TOP2AP11388 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC7.72□□□□□ -1.17
TOP2AP11388 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
TOP2AP11388 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.72□□□□□ -1.17
TOP2AP11388 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.72□□□□□ -1.17
TOP2AP11388 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TOP2AP11388 MAPK10-349ENST00000641767 3661 ntBASIC7.72□□□□□ -1.17
TOP2AP11388 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
TOP2AP11388 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.17
TOP2AP11388 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
TOP2AP11388 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
TOP2AP11388 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TOP2AP11388 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC7.71□□□□□ -1.17
TOP2AP11388 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
TOP2AP11388 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
TOP2AP11388 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.18
TOP2AP11388 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC7.71□□□□□ -1.18
TOP2AP11388 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TOP2AP11388 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TOP2AP11388 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOP2AP11388 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TOP2AP11388 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC7.71□□□□□ -1.18
TOP2AP11388 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOP2AP11388 SNORA5.1-201ENST00000384275 131 ntBASIC7.71□□□□□ -1.18
TOP2AP11388 FCF1P5-201ENST00000406490 482 ntBASIC7.71□□□□□ -1.18
TOP2AP11388 AL451062.2-201ENST00000427515 271 ntBASIC7.71□□□□□ -1.18
TOP2AP11388 COX6B1P7-201ENST00000430845 235 ntBASIC7.71□□□□□ -1.18
TOP2AP11388 MRPS21P3-201ENST00000436696 262 ntBASIC7.71□□□□□ -1.18
TOP2AP11388 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
TOP2AP11388 AC099522.1-202ENST00000514718 367 ntBASIC7.71□□□□□ -1.18
TOP2AP11388 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.71□□□□□ -1.18
TOP2AP11388 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.71□□□□□ -1.18
TOP2AP11388 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
TOP2AP11388 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TOP2AP11388 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
TOP2AP11388 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TOP2AP11388 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TOP2AP11388 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TOP2AP11388 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TOP2AP11388 AC073136.1-201ENST00000449426 2884 ntBASIC7.7□□□□□ -1.18
TOP2AP11388 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TOP2AP11388 TRAV35-201ENST00000390462 330 ntBASIC7.7□□□□□ -1.18
TOP2AP11388 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TOP2AP11388 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.7□□□□□ -1.18
TOP2AP11388 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.7□□□□□ -1.18
TOP2AP11388 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC7.7□□□□□ -1.18
TOP2AP11388 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.7□□□□□ -1.18
TOP2AP11388 AC010374.1-201ENST00000503762 1237 ntBASIC7.7□□□□□ -1.18
TOP2AP11388 RNA5SP230-201ENST00000517039 122 ntBASIC7.7□□□□□ -1.18
TOP2AP11388 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms