Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL049839.1-201ENST00000556151 657 ntBASIC4.01□□□□□ -1.77
CD74P04233 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.01□□□□□ -1.77
CD74P04233 AC093249.4-201ENST00000564755 259 ntBASIC4.01□□□□□ -1.77
CD74P04233 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.01□□□□□ -1.77
CD74P04233 AL121834.1-201ENST00000572284 509 ntBASIC4.01□□□□□ -1.77
CD74P04233 AP000919.1-201ENST00000582850 985 ntBASIC4.01□□□□□ -1.77
CD74P04233 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.01□□□□□ -1.77
CD74P04233 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CD74P04233 AL353726.1-201ENST00000614041 1000 ntBASIC4.01□□□□□ -1.77
CD74P04233 AL669942.2-201ENST00000620352 697 ntBASIC4.01□□□□□ -1.77
CD74P04233 AC011815.3-201ENST00000624194 473 ntBASIC4.01□□□□□ -1.77
CD74P04233 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.01□□□□□ -1.77
CD74P04233 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CD74P04233 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CD74P04233 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CD74P04233 AC092079.1-201ENST00000558620 1985 ntBASIC4.01□□□□□ -1.77
CD74P04233 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CD74P04233 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CD74P04233 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CD74P04233 AC009229.4-201ENST00000623854 1947 ntBASIC4.01□□□□□ -1.77
CD74P04233 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CD74P04233 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CD74P04233 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4□□□□□ -1.77
CD74P04233 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4□□□□□ -1.77
CD74P04233 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 AC233968.1-201ENST00000611212 1300 ntBASIC4□□□□□ -1.77
CD74P04233 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 AC090017.1-201ENST00000548612 1779 ntBASIC4□□□□□ -1.77
CD74P04233 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CD74P04233 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4□□□□□ -1.77
CD74P04233 AC011155.1-201ENST00000316512 456 ntBASIC4□□□□□ -1.77
CD74P04233 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CD74P04233 RNA5SP183-201ENST00000362452 119 ntBASIC4□□□□□ -1.77
CD74P04233 SNORA17.1-201ENST00000362945 126 ntBASIC4□□□□□ -1.77
CD74P04233 RNU1-43P-201ENST00000365052 165 ntBASIC4□□□□□ -1.77
CD74P04233 AC009804.1-201ENST00000400949 179 ntBASIC4□□□□□ -1.77
CD74P04233 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4□□□□□ -1.77
CD74P04233 GTF3AP1-201ENST00000416942 1004 ntBASIC4□□□□□ -1.77
CD74P04233 BMS1P13-201ENST00000417301 885 ntBASIC4□□□□□ -1.77
CD74P04233 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4□□□□□ -1.77
CD74P04233 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4□□□□□ -1.77
CD74P04233 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 BRWD1P3-201ENST00000428816 390 ntBASIC4□□□□□ -1.77
CD74P04233 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4□□□□□ -1.77
CD74P04233 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4□□□□□ -1.77
CD74P04233 AC116562.1-201ENST00000485355 781 ntBASIC4□□□□□ -1.77
CD74P04233 AC008638.1-201ENST00000506035 866 ntBASIC4□□□□□ -1.77
CD74P04233 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4□□□□□ -1.77
CD74P04233 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4□□□□□ -1.77
CD74P04233 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CD74P04233 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4□□□□□ -1.77
CD74P04233 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4□□□□□ -1.77
CD74P04233 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4□□□□□ -1.77
CD74P04233 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4□□□□□ -1.77
CD74P04233 OR8X1P-201ENST00000534542 869 ntBASIC4□□□□□ -1.77
CD74P04233 AC069240.1-201ENST00000548774 375 ntBASIC4□□□□□ -1.77
CD74P04233 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 MIR4489-201ENST00000578869 62 ntBASIC4□□□□□ -1.77
CD74P04233 NPM1P45-201ENST00000583151 559 ntBASIC4□□□□□ -1.77
CD74P04233 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4□□□□□ -1.77
CD74P04233 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4□□□□□ -1.77
CD74P04233 OR7E18P-201ENST00000592589 702 ntBASIC4□□□□□ -1.77
CD74P04233 SUMO2P15-201ENST00000604285 278 ntBASIC4□□□□□ -1.77
CD74P04233 AL121932.1-201ENST00000605542 214 ntBASIC4□□□□□ -1.77
CD74P04233 AP000864.1-201ENST00000609424 650 ntBASIC4□□□□□ -1.77
CD74P04233 AC023509.5-201ENST00000617434 807 ntBASIC4□□□□□ -1.77
CD74P04233 AL353662.3-201ENST00000625131 237 ntBASIC4□□□□□ -1.77
CD74P04233 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
CD74P04233 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4□□□□□ -1.77
CD74P04233 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
CD74P04233 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CD74P04233 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4□□□□□ -1.77
CD74P04233 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD74P04233 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD74P04233 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CD74P04233 AL355852.1-201ENST00000454081 1771 ntBASIC3.99□□□□□ -1.77
CD74P04233 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.99□□□□□ -1.77
CD74P04233 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CD74P04233 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms