Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.36□□□□□ -1.55
COL4A1P02462 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A1P02462 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.36□□□□□ -1.55
COL4A1P02462 AC099676.1-201ENST00000608886 657 ntBASIC5.36□□□□□ -1.55
COL4A1P02462 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A1P02462 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
COL4A1P02462 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.36□□□□□ -1.55
COL4A1P02462 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A1P02462 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A1P02462 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A1P02462 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A1P02462 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COL4A1P02462 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A1P02462 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A1P02462 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A1P02462 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COL4A1P02462 EI24P3-201ENST00000399046 1062 ntBASIC5.35□□□□□ -1.55
COL4A1P02462 AL445189.1-201ENST00000405722 338 ntBASIC5.35□□□□□ -1.55
COL4A1P02462 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A1P02462 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.35□□□□□ -1.55
COL4A1P02462 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A1P02462 COX6B1P7-201ENST00000430845 235 ntBASIC5.35□□□□□ -1.55
COL4A1P02462 RPL7P33-201ENST00000444159 742 ntBASIC5.35□□□□□ -1.55
COL4A1P02462 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A1P02462 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A1P02462 RPS4XP18-201ENST00000495480 763 ntBASIC5.35□□□□□ -1.55
COL4A1P02462 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A1P02462 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A1P02462 RNA5SP360-201ENST00000516555 118 ntBASIC5.35□□□□□ -1.55
COL4A1P02462 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.35□□□□□ -1.55
COL4A1P02462 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
COL4A1P02462 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
COL4A1P02462 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A1P02462 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
COL4A1P02462 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A1P02462 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A1P02462 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL4A1P02462 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.35□□□□□ -1.55
COL4A1P02462 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
COL4A1P02462 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A1P02462 RN7SKP224-201ENST00000364140 325 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
COL4A1P02462 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.34□□□□□ -1.55
COL4A1P02462 RRM2P4-201ENST00000441721 562 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.34□□□□□ -1.55
COL4A1P02462 RPL35AP15-201ENST00000468042 339 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 RPL23AP37-201ENST00000479658 549 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 TPT1P3-201ENST00000492841 512 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.34□□□□□ -1.55
COL4A1P02462 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.34□□□□□ -1.55
COL4A1P02462 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.34□□□□□ -1.55
COL4A1P02462 MED28P5-201ENST00000528254 438 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 AC105233.3-201ENST00000531125 744 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A1P02462 HNRNPCP4-201ENST00000571636 900 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 Z98200.1-201ENST00000607298 470 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 MIR8059-201ENST00000620427 81 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 AC039056.2-201ENST00000622261 511 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A1P02462 NXPH1-205ENST00000602349 1953 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A1P02462 AL137141.1-201ENST00000624622 4836 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
COL4A1P02462 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.34□□□□□ -1.55
COL4A1P02462 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL4A1P02462 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.34□□□□□ -1.56
COL4A1P02462 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
COL4A1P02462 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.34□□□□□ -1.56
COL4A1P02462 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A1P02462 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.34□□□□□ -1.56
COL4A1P02462 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.34□□□□□ -1.56
COL4A1P02462 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.34□□□□□ -1.56
COL4A1P02462 TBCAP1-201ENST00000436520 327 ntBASIC5.34□□□□□ -1.56
COL4A1P02462 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.34□□□□□ -1.56
COL4A1P02462 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.34□□□□□ -1.56
COL4A1P02462 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.34□□□□□ -1.56
COL4A1P02462 GLRXP2-201ENST00000555594 321 ntBASIC5.34□□□□□ -1.56
COL4A1P02462 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.34□□□□□ -1.56
COL4A1P02462 AC005520.3-201ENST00000602874 370 ntBASIC5.34□□□□□ -1.56
COL4A1P02462 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.34□□□□□ -1.56
COL4A1P02462 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
COL4A1P02462 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A1P02462 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A1P02462 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL4A1P02462 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A1P02462 AP000473.2-201ENST00000602659 1537 ntBASIC5.33□□□□□ -1.56
COL4A1P02462 MAPK10-372ENST00000641954 3413 ntBASIC5.33□□□□□ -1.56
COL4A1P02462 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A1P02462 AL161912.2-201ENST00000565707 3007 ntBASIC5.33□□□□□ -1.56
COL4A1P02462 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A1P02462 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL4A1P02462 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.33□□□□□ -1.56
COL4A1P02462 AC104260.2-201ENST00000623551 3497 ntBASIC5.33□□□□□ -1.56
COL4A1P02462 RNA5SP171-201ENST00000391071 115 ntBASIC5.33□□□□□ -1.56
COL4A1P02462 AL117339.2-201ENST00000430475 180 ntBASIC5.33□□□□□ -1.56
COL4A1P02462 RPS7P7-201ENST00000463499 571 ntBASIC5.33□□□□□ -1.56
COL4A1P02462 SLC25A15P5-201ENST00000508033 253 ntBASIC5.33□□□□□ -1.56
COL4A1P02462 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.33□□□□□ -1.56
COL4A1P02462 FTH1P21-201ENST00000512179 511 ntBASIC5.33□□□□□ -1.56
COL4A1P02462 OR7E10P-201ENST00000526420 991 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms