Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AF186996.5-201ENST00000418098 904 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
RIPK2O43353 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.86□□□□□ -1.63
RIPK2O43353 AC005033.1-201ENST00000428904 813 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 RPL12P28-201ENST00000430852 489 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 RPS17P8-201ENST00000434525 335 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC092447.2-201ENST00000435487 669 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 RPL31P15-201ENST00000449770 338 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 EIF2S2P4-201ENST00000461070 984 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK2O43353 AC116562.1-201ENST00000485355 781 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 HMGN2P25-201ENST00000486956 268 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 PFN1P8-201ENST00000497012 543 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.86□□□□□ -1.63
RIPK2O43353 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.86□□□□□ -1.63
RIPK2O43353 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK2O43353 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK2O43353 AC090022.1-201ENST00000546569 311 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 HNRNPCP4-201ENST00000571636 900 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 SLC25A36P1-201ENST00000590111 465 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 AL589674.2-201ENST00000604304 337 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC007423.1-201ENST00000605009 627 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AL133406.3-201ENST00000606817 541 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 AL627230.1-201ENST00000613077 211 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 AL591926.8-201ENST00000616876 211 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK2O43353 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.86□□□□□ -1.63
RIPK2O43353 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.86□□□□□ -1.63
RIPK2O43353 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RIPK2O43353 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 VN2R3P-201ENST00000422626 1412 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 SCN1A-220ENST00000641603 12506 ntBASIC4.86□□□□□ -1.63
RIPK2O43353 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK2O43353 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RIPK2O43353 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.86□□□□□ -1.63
RIPK2O43353 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.85□□□□□ -1.63
RIPK2O43353 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.85□□□□□ -1.63
RIPK2O43353 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RIPK2O43353 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RIPK2O43353 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RIPK2O43353 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RIPK2O43353 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RIPK2O43353 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.85□□□□□ -1.63
RIPK2O43353 AC104843.2-201ENST00000427666 297 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.85□□□□□ -1.63
RIPK2O43353 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.85□□□□□ -1.63
RIPK2O43353 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.85□□□□□ -1.63
RIPK2O43353 AC005912.1-201ENST00000495392 255 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 STMN1P2-201ENST00000508435 439 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.85□□□□□ -1.63
RIPK2O43353 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.85□□□□□ -1.63
RIPK2O43353 AC034244.2-201ENST00000514668 858 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.85□□□□□ -1.63
RIPK2O43353 AC084033.1-201ENST00000550830 633 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 AL049779.2-201ENST00000553847 315 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 HMGB3P26-201ENST00000560051 582 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.85□□□□□ -1.63
RIPK2O43353 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.85□□□□□ -1.63
RIPK2O43353 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.85□□□□□ -1.63
RIPK2O43353 HMGB1P51-201ENST00000605166 638 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 AL121932.1-201ENST00000605542 214 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 AC005021.1-201ENST00000608730 355 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 AC107905.1-201ENST00000616204 426 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 AL353662.3-201ENST00000625131 237 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 MAPK10-320ENST00000641462 6696 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 AL118496.1-201ENST00000440201 1812 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 TLK1P1-201ENST00000456760 2440 ntBASIC4.85□□□□□ -1.63
RIPK2O43353 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RIPK2O43353 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK2O43353 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RIPK2O43353 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms