Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.51□□□□□ -1.53
PHGDHO43175 AP004609.2-201ENST00000532177 190 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.51□□□□□ -1.53
PHGDHO43175 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.51□□□□□ -1.53
PHGDHO43175 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 ZNF321P-202ENST00000550843 495 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.51□□□□□ -1.53
PHGDHO43175 AC090751.1-201ENST00000566966 267 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.51□□□□□ -1.53
PHGDHO43175 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.51□□□□□ -1.53
PHGDHO43175 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.51□□□□□ -1.53
PHGDHO43175 AC021171.1-201ENST00000603137 706 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AC023509.5-201ENST00000617434 807 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.51□□□□□ -1.53
PHGDHO43175 ATE1-AS1-202ENST00000636460 506 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PHGDHO43175 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
PHGDHO43175 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PHGDHO43175 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PHGDHO43175 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 AC096656.1-201ENST00000623826 1364 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.51□□□□□ -1.53
PHGDHO43175 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.51□□□□□ -1.53
PHGDHO43175 AC006042.3-201ENST00000454684 1469 ntBASIC5.51□□□□□ -1.53
PHGDHO43175 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.51□□□□□ -1.53
PHGDHO43175 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHGDHO43175 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PHGDHO43175 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.5□□□□□ -1.53
PHGDHO43175 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
PHGDHO43175 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PHGDHO43175 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PHGDHO43175 OR1L1-202ENST00000373686 1083 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.5□□□□□ -1.53
PHGDHO43175 MIR621-201ENST00000384919 96 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 ERHP2-201ENST00000402323 299 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AL590084.1-201ENST00000407885 387 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 AC245060.4-201ENST00000413293 1121 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
PHGDHO43175 HMGN2P27-201ENST00000427352 270 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.5□□□□□ -1.53
PHGDHO43175 AL022331.1-201ENST00000429025 477 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.5□□□□□ -1.53
PHGDHO43175 RPL23AP19-201ENST00000436229 369 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 UBE2V1P5-201ENST00000440070 405 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC007327.1-201ENST00000447461 264 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 AURKAPS1-201ENST00000451805 1212 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 MRPL35P4-201ENST00000453682 566 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.5□□□□□ -1.53
PHGDHO43175 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.5□□□□□ -1.53
PHGDHO43175 AL161747.1-201ENST00000480068 358 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.5□□□□□ -1.53
PHGDHO43175 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 IGBP1P5-201ENST00000507524 1000 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.5□□□□□ -1.53
PHGDHO43175 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.5□□□□□ -1.53
PHGDHO43175 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.5□□□□□ -1.53
PHGDHO43175 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 AC009094.1-201ENST00000564443 426 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 AC005412.1-201ENST00000580812 1049 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 AC068790.7-201ENST00000602347 528 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.5□□□□□ -1.53
PHGDHO43175 RN7SL544P-201ENST00000617232 284 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 RN7SL763P-201ENST00000620922 284 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC129778.1-202ENST00000623812 261 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC016717.3-201ENST00000624730 554 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.5□□□□□ -1.53
PHGDHO43175 AL591379.1-207ENST00000635982 261 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 AC087565.3-203ENST00000641018 837 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 MFSD8-245ENST00000641743 948 ntBASIC5.5□□□□□ -1.53
PHGDHO43175 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.5□□□□□ -1.53
PHGDHO43175 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.5□□□□□ -1.53
PHGDHO43175 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHGDHO43175 SRRM1P3-201ENST00000426911 2678 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms