Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CGB1A6NKQ9 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CGB1A6NKQ9 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CGB1A6NKQ9 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CGB1A6NKQ9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.82□□□□□ -1.64
CGB1A6NKQ9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 GTF2H2B-203ENST00000508065 1432 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MTND4P31-201ENST00000425607 1343 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 Y_RNA.88-201ENST00000363029 99 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 RNU105B-201ENST00000364478 208 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 RNA5SP279-201ENST00000365513 117 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 SNORD65C-201ENST00000390962 71 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 RNU6-757P-201ENST00000410334 100 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 NPM1P40-201ENST00000412758 733 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC007899.1-201ENST00000412776 775 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AL096829.1-201ENST00000413677 457 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 IPPKP1-201ENST00000422501 768 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MTCO2P19-201ENST00000427513 598 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 RPS3AP38-201ENST00000435889 763 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC009263.1-201ENST00000441193 1239 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MTND3P1-201ENST00000441336 220 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AL645936.1-201ENST00000441979 518 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC005297.1-201ENST00000444765 862 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 ZNF619P1-201ENST00000446539 752 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 SDC4P-201ENST00000453285 601 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC124945.1-201ENST00000485133 188 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 RPL23AP40-201ENST00000487630 390 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 SNRPCP11-201ENST00000492453 205 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AL024509.2-201ENST00000493462 493 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC116353.2-201ENST00000505332 712 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 TOMM22P4-201ENST00000511318 336 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 SERPINE4P-201ENST00000554978 281 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AP005205.1-201ENST00000563503 508 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC116553.2-201ENST00000564203 463 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 ELOCP28-201ENST00000590044 317 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MTCYBP22-201ENST00000603788 447 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AL080312.2-201ENST00000613001 630 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AL139418.1-201ENST00000613613 177 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MIR7973-1-201ENST00000614683 76 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC026368.1-201ENST00000614934 690 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 AC011815.3-201ENST00000624194 473 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.81□□□□□ -1.64
CGB1A6NKQ9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CGB1A6NKQ9 MTCO1P18-201ENST00000455518 1419 ntBASIC4.8□□□□□ -1.64
CGB1A6NKQ9 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CGB1A6NKQ9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms